RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 OR2G6Q5TZ20 316 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 ADAM5Q6NVV9 412 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 FDX2Q6P4F2 183 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 ZNF101Q8IZC7 436 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 OR52H1Q8NGJ2 320 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 SPRYD4Q8WW59 207 aaPredicted RBP18.11■□□□□ 0.49
LSM6-207ENST00000515311 RORBQ92753 470 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 RNF166Q96A37 237 aaPredicted RBP18.11■□□□□ 0.49
LSM6-207ENST00000515311 COG8Q96MW5 612 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 HS3ST6Q96QI5 342 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 TUBG2Q9NRH3 451 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 SNX5Q9Y5X3 404 aa18.11■□□□□ 0.49
LSM6-207ENST00000515311 PTPN13Q12923 2485 aa18.1■□□□□ 0.49
LSM6-207ENST00000515311 FAM221AA4D161 298 aa18.1■□□□□ 0.49
LSM6-207ENST00000515311 SHISA9B4DS77 424 aa18.1■□□□□ 0.49
LSM6-207ENST00000515311 LOC110117498-PIK3R3F6TDL0 507 aa18.1■□□□□ 0.49
LSM6-207ENST00000515311 RPP14O95059 124 aaKnown RBP18.1■□□□□ 0.49
LSM6-207ENST00000515311 LCATP04180 440 aa18.1■□□□□ 0.49
LSM6-207ENST00000515311 ANXA2P07355 339 aaKnown RBP18.1■□□□□ 0.49
LSM6-207ENST00000515311 GBX2P52951 348 aaPredicted RBP18.1■□□□□ 0.49
LSM6-207ENST00000515311 CDH15P55291 814 aa18.1■□□□□ 0.49
LSM6-207ENST00000515311 RFPL4BQ6ZWI9 263 aa18.1■□□□□ 0.49
LSM6-207ENST00000515311 NAA40Q86UY6 237 aa18.1■□□□□ 0.49
LSM6-207ENST00000515311 SVOPQ8N4V2 548 aa18.1■□□□□ 0.49
LSM6-207ENST00000515311 ABHD4Q8TB40 342 aa18.1■□□□□ 0.49
LSM6-207ENST00000515311 BABAM2Q9NXR7 383 aa18.1■□□□□ 0.49
LSM6-207ENST00000515311 NUFIP1Q9UHK0 495 aaKnown RBP18.1■□□□□ 0.49
LSM6-207ENST00000515311 LSM2Q9Y333 95 aaKnown RBP18.1■□□□□ 0.49
LSM6-207ENST00000515311 PLCE1Q9P212 2302 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 PNPP00491 289 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 NGFP01138 241 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 FAM157BP0CG42 384 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 SLC2A1P11166 492 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 TGM4P49221 684 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 RPS23P62266 143 aaKnown RBP18.09■□□□□ 0.49
LSM6-207ENST00000515311 MFGE8Q08431 387 aaPredicted RBP18.09■□□□□ 0.49
LSM6-207ENST00000515311 SNTB2Q13425 540 aaKnown RBP18.09■□□□□ 0.49
LSM6-207ENST00000515311 CCDC58Q4VC31 144 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 FAM57BQ71RH2 274 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 SPARTQ8N0X7 666 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 KBTBD8Q8NFY9 601 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 OR5L1Q8NGL2 311 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 GATAD2BQ8WXI9 593 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 TRIM36Q9NQ86 728 aa18.09■□□□□ 0.49
LSM6-207ENST00000515311 HRNRQ86YZ3 2850 aaPredicted RBP18.09■□□□□ 0.49
LSM6-207ENST00000515311 H3BSA7 217 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 GLRXP35754 106 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 PPP1CBP62140 327 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 SPHARQ15513 63 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 SNAI3Q3KNW1 292 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 BCL2L15Q5TBC7 163 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 ZNF544Q6NX49 715 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 ZNF704Q6ZNC4 412 aaPredicted RBP18.08■□□□□ 0.48
LSM6-207ENST00000515311 CATSPERDQ86XM0 798 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 TSPAN14Q8NG11 270 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 OR2G2Q8NGZ5 317 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 PGAM5Q96HS1 289 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 OR10A2Q9H208 303 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 ZNF442Q9H7R0 627 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 BRD7Q9NPI1 651 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 ACOT13Q9NPJ3 140 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 G6PC2Q9NQR9 355 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 POU2F3Q9UKI9 436 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 OR52A1Q9UKL2 312 aa18.08■□□□□ 0.48
LSM6-207ENST00000515311 ABCA4P78363 2273 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 A0A0U1RQV5 110 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 E9PI62 339 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 CTAG2O75638 210 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 COL8A1P27658 744 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 PSMB10P40306 273 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 MAP2K4P45985 399 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 CCR9P51686 369 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 TAS2R43P59537 309 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 BDH1Q02338 343 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 EMX1Q04741 257 aaPredicted RBP18.07■□□□□ 0.48
LSM6-207ENST00000515311 ACSM1Q08AH1 577 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 MALLQ13021 153 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 KLBQ86Z14 1044 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 OR8B12Q8NGG6 310 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 OR1J1Q8NGS3 322 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 PBOV1Q9GZY1 135 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 OR51B6Q9H340 312 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 RGCCQ9H4X1 137 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 CA10Q9NS85 328 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 ZNF391Q9UJN7 358 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 STARD10Q9Y365 291 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 ATP23Q9Y6H3 246 aa18.07■□□□□ 0.48
LSM6-207ENST00000515311 A0A087WXM4 84 aa18.06■□□□□ 0.48
LSM6-207ENST00000515311 XRCC2O43543 280 aa18.06■□□□□ 0.48
LSM6-207ENST00000515311 PLAUP00749 431 aa18.06■□□□□ 0.48
LSM6-207ENST00000515311 LCKP06239 509 aa18.06■□□□□ 0.48
LSM6-207ENST00000515311 MED22Q15528 200 aa18.06■□□□□ 0.48
LSM6-207ENST00000515311 ZNF672Q499Z4 452 aaPredicted RBP18.06■□□□□ 0.48
LSM6-207ENST00000515311 WDR38Q5JTN6 314 aa18.06■□□□□ 0.48
LSM6-207ENST00000515311 RPL22L1Q6P5R6 122 aaKnown RBP18.06■□□□□ 0.48
LSM6-207ENST00000515311 ELMOD2Q8IZ81 293 aa18.06■□□□□ 0.48
LSM6-207ENST00000515311 PRSS35Q8N3Z0 413 aa18.06■□□□□ 0.48
LSM6-207ENST00000515311 LILRB1Q8NHL6 650 aaPredicted RBP18.06■□□□□ 0.48
LSM6-207ENST00000515311 RPS4Y2Q8TD47 263 aa18.06■□□□□ 0.48
LSM6-207ENST00000515311 TMEM171Q8WVE6 324 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms