RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 H1F0P07305 194 aaKnown RBP12.49□□□□□ -0.41
DDR1-278ENST00000515233 ACSM4P0C7M7 580 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 MDH1P40925 334 aaKnown RBP12.49□□□□□ -0.41
DDR1-278ENST00000515233 RAG2P55895 527 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 RPL15P61313 204 aaKnown RBP12.49□□□□□ -0.41
DDR1-278ENST00000515233 RELBQ01201 579 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 ECH1Q13011 328 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 MEP1BQ16820 701 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 CLEC12AQ5QGZ9 265 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 CD276Q5ZPR3 534 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 OLFML2AQ68BL7 652 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 CGB2Q6NT52 195 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 C17orf107Q6ZR85 190 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 OR6V1Q8N148 313 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 OR11L1Q8NGX0 322 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 RSRC1Q96IZ7 334 aaKnown RBP12.49□□□□□ -0.41
DDR1-278ENST00000515233 CITED1Q99966 193 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 CAPN7Q9Y6W3 813 aa12.49□□□□□ -0.41
DDR1-278ENST00000515233 CLPSL1A2RUU4 121 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 ZNF879B4DU55 563 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 C22orf46C9J442 243 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 NME4O00746 187 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 GSTA4O15217 222 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 FAM20BO75063 409 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 PTBP3O95758 552 aaKnown RBP12.48□□□□□ -0.41
DDR1-278ENST00000515233 MMP9P14780 707 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 RHCEP18577 417 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 CENPAP49450 140 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 SRSF4Q08170 494 aaKnown RBP12.48□□□□□ -0.41
DDR1-278ENST00000515233 MALLQ13021 153 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 KCNJ8Q15842 424 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 SLC18B1Q6NT16 456 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 C8orf82Q6P1X6 216 aaPredicted RBP12.48□□□□□ -0.41
DDR1-278ENST00000515233 CORO6Q6QEF8 472 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 SMARCD3Q6STE5 483 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 NAA40Q86UY6 237 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 PLPP7Q8NBV4 271 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 SLC26A10Q8NG04 563 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 PCGF1Q9BSM1 259 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 CHIAQ9BZP6 476 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 SLC22A4Q9H015 551 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 SRA1Q9HD15 236 aaKnown RBP12.48□□□□□ -0.41
DDR1-278ENST00000515233 FGFR1OP2Q9NVK5 253 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 NDUFAF4Q9P032 175 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 ERVK-18Q9QC07 812 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 RNF7Q9UBF6 113 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 TMCC3Q9ULS5 477 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 AURKCQ9UQB9 309 aa12.48□□□□□ -0.41
DDR1-278ENST00000515233 FAM32AQ9Y421 112 aaKnown RBP12.48□□□□□ -0.41
DDR1-278ENST00000515233 CENPVL3A0A0U1RRI6 287 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 UNC119BA6NIH7 251 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 F5H5K5 113 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 ARPC3O15145 178 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 NDUFA2O43678 99 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 GMDSO60547 372 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 TOX4O94842 621 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 MELTFP08582 738 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 CFHR2P36980 270 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 GSK3BP49841 420 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 SLC7A2P52569 658 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 MPPED2Q15777 294 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 SLC36A3Q495N2 470 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 CFAP77Q6ZQR2 320 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 PGAP1Q75T13 922 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 ZBTB46Q86UZ6 589 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 C19orf18Q8NEA5 215 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 TBC1D15Q8TC07 691 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 DYRK2Q92630 601 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 SLCO4A1Q96BD0 722 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 C7orf34Q96L11 122 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 ERMAPQ96PL5 475 aaPredicted RBP12.47□□□□□ -0.41
DDR1-278ENST00000515233 TBX15Q96SF7 602 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 PITX2Q99697 317 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 ATF6BQ99941 703 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 MARCH7Q9H992 704 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 KRCC1Q9NPI7 259 aaPredicted RBP12.47□□□□□ -0.41
DDR1-278ENST00000515233 KIF17Q9P2E2 1029 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 CTSZQ9UBR2 303 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 CYB5R1Q9UHQ9 305 aa12.47□□□□□ -0.41
DDR1-278ENST00000515233 NOP16Q9Y3C1 178 aaKnown RBP12.47□□□□□ -0.41
DDR1-278ENST00000515233 A0A0G2JK05 382 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 LGALS8O00214 317 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 NDUFAB1O14561 156 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 LCATP04180 440 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 SFTPBP07988 381 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 TPTEP56180 551 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 PRSS12P56730 875 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 SF3A3Q12874 501 aaKnown RBP eCLIP12.46□□□□□ -0.419e-7■■■■□ 24.7
DDR1-278ENST00000515233 SEC23BQ15437 767 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 RFX4Q33E94 735 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 C11orf91Q3C1V1 193 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 FGD3Q5JSP0 725 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 PRAMEF6Q5VXH4 476 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 RUSC1-AS1Q66K80 236 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 ZNF620Q6ZNG0 422 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 RHOUQ7L0Q8 258 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.46□□□□□ -0.41
DDR1-278ENST00000515233 PNLDC1Q8NA58 520 aaKnown RBP12.46□□□□□ -0.41
DDR1-278ENST00000515233 OR2AJ1Q8NGZ0 328 aa12.46□□□□□ -0.41
DDR1-278ENST00000515233 SPRYD4Q8WW59 207 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms