RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 FAM57BQ71RH2 274 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 KRT74Q7RTS7 529 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 ABHD12BQ7Z5M8 362 aaPredicted RBP13.13□□□□□ -0.31
VCAN-211ENST00000513984 AKAP14Q86UN6 197 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 C7orf50Q9BRJ6 194 aaKnown RBP13.13□□□□□ -0.31
VCAN-211ENST00000513984 GPR35Q9HC97 309 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 GPR84Q9NQS5 396 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 NLKQ9UBE8 527 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 MCTS1Q9ULC4 181 aaKnown RBP13.13□□□□□ -0.31
VCAN-211ENST00000513984 TMEM272A0A1B0GTI8 110 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 ACOT7O00154 380 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 CTAG2O75638 210 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 APOC1P02654 83 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 TMIGD3P0DMS9 266 aaPredicted RBP13.13□□□□□ -0.31
VCAN-211ENST00000513984 BDKRB2P30411 391 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 SRP9P49458 86 aaKnown RBP13.13□□□□□ -0.31
VCAN-211ENST00000513984 TNFSF10P50591 281 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 TAS2R20P59543 309 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 DYRK1AQ13627 763 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 KLF9Q13886 244 aaPredicted RBP13.13□□□□□ -0.31
VCAN-211ENST00000513984 SLC10A1Q14973 349 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 RAB35Q15286 201 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 RSPO1Q2MKA7 263 aaPredicted RBP13.13□□□□□ -0.31
VCAN-211ENST00000513984 PLA1AQ53H76 456 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 RNASE12Q5GAN4 147 aaKnown RBP13.13□□□□□ -0.31
VCAN-211ENST00000513984 DOK3Q7L591 496 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 GLCCI1Q86VQ1 547 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 OR1M1Q8NGA1 313 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 OR5D14Q8NGL3 314 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 UPRTQ96BW1 309 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 FOXB1Q99853 325 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 MARVELD1Q9BSK0 173 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 LINC00470Q9BZP3 86 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 RNF122Q9H9V4 155 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 DLL3Q9NYJ7 618 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 PLEK2Q9NYT0 353 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 EMC3Q9P0I2 261 aa13.13□□□□□ -0.31
VCAN-211ENST00000513984 CGGBP1Q9UFW8 167 aaPredicted RBP13.13□□□□□ -0.31
VCAN-211ENST00000513984 NOSIPQ9Y314 301 aaKnown RBP13.13□□□□□ -0.31
VCAN-211ENST00000513984 RBMX2Q9Y388 322 aaKnown RBP13.13□□□□□ -0.31
VCAN-211ENST00000513984 A0A0B4J293 547 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 A0A0U1RQV5 110 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 DCDC2BA2VCK2 349 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 CRYGSP22914 178 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 GNALP38405 381 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 GDNFP39905 211 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 EFNB2P52799 333 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 CAPZA1P52907 286 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 CAMK2BQ13554 666 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 RTP5Q14D33 572 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 CEACAM16Q2WEN9 425 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 MYO7BQ6PIF6 2116 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 IGFL2Q6UWQ7 119 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 DNM1P46Q6ZS02 220 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 SIAH3Q8IW03 269 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 JAGN1Q8N5M9 183 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 SORCS2Q96PQ0 1159 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 SLCO5A1Q9H2Y9 848 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 ZDHHC11Q9H8X9 412 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 BCO1Q9HAY6 547 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 TMEM138Q9NPI0 162 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 LIPGQ9Y5X9 500 aa13.12□□□□□ -0.31
VCAN-211ENST00000513984 GGT3PA6NGU5 568 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 CENPXA8MT69 81 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 ZNF724A8MTY0 619 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 E9PLN8 166 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 M0R135 149 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 LDLRAD4O15165 306 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 SGCEO43556 437 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 SYNGR3O43761 229 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 ORC5O43913 435 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 MRPL33O75394 65 aaKnown RBP13.11□□□□□ -0.31
VCAN-211ENST00000513984 KRT33AO76009 404 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 GABRA1P14867 456 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 B4GALT1P15291 398 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 ARSBP15848 533 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 ZNF20P17024 532 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 RAB3AP20336 220 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 TPTEP56180 551 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 SCRN3Q0VDG4 424 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 STK11Q15831 433 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 NRN1LQ496H8 165 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 RSBN1Q5VWQ0 802 aaPredicted RBP13.11□□□□□ -0.31
VCAN-211ENST00000513984 Q6ZSR3 168 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 ADGRE4PQ86SQ3 457 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 BIVMQ86UB2 503 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 COMMD2Q86X83 199 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 FDCSPQ8NFU4 85 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 OR52I2Q8NH67 350 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 FCAMRQ8WWV6 532 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 SPTSSAQ969W0 71 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 CREB3L1Q96BA8 519 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 ZNF799Q96GE5 643 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 PGAM5Q96HS1 289 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 NKX3-1Q99801 234 aaPredicted RBP13.11□□□□□ -0.31
VCAN-211ENST00000513984 UQCC2Q9BRT2 126 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 SOX7Q9BT81 388 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 KCNK15Q9H427 330 aa13.11□□□□□ -0.31
VCAN-211ENST00000513984 METTL17Q9H7H0 456 aaPredicted RBP13.11□□□□□ -0.31
VCAN-211ENST00000513984 PARPBPQ9NWS1 579 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms