RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 FHL1Q13642 323 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 KRT71Q3SY84 523 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 OTPQ5XKR4 325 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 COLCA1Q6ZS62 124 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 NDUFA11Q86Y39 141 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 FAM90A1Q86YD7 464 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 BOLLQ8N9W6 283 aaKnown RBP8.95□□□□□ -0.98
DDX41-216ENST00000513562 OR4F17Q8NGA8 305 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 RASSF5Q8WWW0 418 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 ST8SIA4Q92187 359 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 R3HDM4Q96D70 268 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 DMRTB1Q96MA1 342 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 OR4F4Q96R69 305 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 KCNK9Q9NPC2 374 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 SIRT7Q9NRC8 400 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 CCDC167Q9P0B6 97 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 ONECUT1Q9UBC0 465 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 KAAG1Q9UBP8 84 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 RIMS3Q9UJD0 308 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 MAB21L2Q9Y586 359 aa8.95□□□□□ -0.98
DDX41-216ENST00000513562 MEIOCA2RUB1 952 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 HTR3EA5X5Y0 456 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 ADARB2-AS1A8MUL3 147 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 H3BUX3 64 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 AHCYL1O43865 530 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 FBXO24O75426 580 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 VSIG10L2P0DP72 767 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 CTLA4P16410 223 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 WDR4P57081 412 aaKnown RBP8.94□□□□□ -0.98
DDX41-216ENST00000513562 PRB3Q04118 309 aaPredicted RBP8.94□□□□□ -0.98
DDX41-216ENST00000513562 PIN1Q13526 163 aaPredicted RBP8.94□□□□□ -0.98
DDX41-216ENST00000513562 SELPLGQ14242 412 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 GK2Q14410 553 aaPredicted RBP8.94□□□□□ -0.98
DDX41-216ENST00000513562 MESTQ5EB52 335 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 TNFAIP8L3Q5GJ75 292 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 CRIP3Q6Q6R5 217 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 CMTM4Q8IZR5 234 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 Q8N7P7 452 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 PLPP7Q8NBV4 271 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 BEND2Q8NDZ0 799 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 WFDC9Q8NEX5 89 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 SLC26A7Q8TE54 656 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 TNFRSF14Q92956 283 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 BPIFA2Q96DR5 249 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 CLPTM1LQ96KA5 538 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 COQ7Q99807 217 aa8.94□□□□□ -0.98
DDX41-216ENST00000513562 DYNC2H1Q8NCM8 4307 aaKnown RBP8.94□□□□□ -0.98
DDX41-216ENST00000513562 DOCK11Q5JSL3 2073 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 SACSQ9NZJ4 4579 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 TRAV27A0A087WT01 109 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 A0A1B0GW55 424 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 A0A1W2PRD5 423 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 A0A1W2PRF3 423 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 A0A1W2PRM7 423 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 PRSS37A4D1T9 235 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 MEGF11A6BM72 1044 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 PPP1R3DO95685 299 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 DUX4L2P0CJ85 424 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 DUX4L3P0CJ86 424 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 DUX4L4P0CJ87 422 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 DUX4L5P0CJ88 424 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 DUX4L6P0CJ89 424 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 DUX4L7P0CJ90 424 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 CD28P10747 220 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 IFI30P13284 250 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 IGLL1P15814 213 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 TNFRSF1BP20333 461 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 DLX1P56177 255 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 MTPNP58546 118 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 VSNL1P62760 191 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 HIST1H3AP68431 136 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 COL10A1Q03692 680 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 ACSM1Q08AH1 577 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 KLRD1Q13241 179 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 KRTAP27-1Q3LI81 207 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 HIST2H3PS2Q5TEC6 136 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 TEX36Q5VZQ5 186 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 DUX4L9Q6RFH8 374 aaPredicted RBP8.93□□□□□ -0.98
DDX41-216ENST00000513562 EPGNQ6UW88 154 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 HIST2H3AQ71DI3 136 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 GLB1L2Q8IW92 636 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 FGFRL1Q8N441 504 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 PNKDQ8N490 385 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 GCSAMQ8N6F7 178 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 ANKRD42Q8N9B4 389 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 FAM156AQ8NDB6 213 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 OR51A7Q8NH64 312 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 AENQ8WTP8 325 aaKnown RBP8.93□□□□□ -0.98
DDX41-216ENST00000513562 OCSTAMPQ9BR26 566 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 ADAT1Q9BUB4 502 aaKnown RBP8.93□□□□□ -0.98
DDX41-216ENST00000513562 SLC22A4Q9H015 551 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 HDHD2Q9H0R4 259 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 KAT8Q9H7Z6 458 aaKnown RBP8.93□□□□□ -0.98
DDX41-216ENST00000513562 RAB18Q9NP72 206 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 DUX4Q9UBX2 424 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 SH3GLB1Q9Y371 365 aa8.93□□□□□ -0.98
DDX41-216ENST00000513562 NOP16Q9Y3C1 178 aaKnown RBP8.93□□□□□ -0.98
DDX41-216ENST00000513562 NOTCH3Q9UM47 2321 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 XKRYO14609 159 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 SHOX2O60902 331 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms