RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 PCDHGA5Q9Y5G8 931 aa10.21□□□□□ -0.78
TCOF1-211ENST00000513346 TRIP12Q14669 1992 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-211ENST00000513346 A0A087X0M5 115 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 A0A1B0GX30 115 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 CD300LBA8K4G0 201 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 HSPB2A8KAH6 182 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 SEC14L6B5MCN3 397 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 IGHEP01854 428 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 RAB4AP20338 218 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 SCAND1P57086 179 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 HSPB2Q16082 182 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 DCAF12Q5T6F0 453 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 ANKRD16Q6P6B7 361 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 TMEM18Q96B42 140 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 OR6C1Q96RD1 312 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF426Q9BUY5 554 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 SEMA6CQ9H3T2 930 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 KIR3DX1Q9H7L2 352 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 VSX1Q9NZR4 365 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-211ENST00000513346 MMP24Q9Y5R2 645 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 A0A087WV62 115 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 MPTX1A8MV57 137 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 E5RGE8 158 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 FTCDNL1E5RQL4 147 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF264O43296 627 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 TBX19O60806 448 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 HTD2P86397 168 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 MOGAT2Q3SYC2 334 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 TMEM128Q5BJH2 165 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 PUSL1Q8N0Z8 303 aaKnown RBP10.2□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF611Q8N823 705 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 OR51A4Q8NGJ6 313 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 CABLES2Q9BTV7 478 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 SHARPINQ9H0F6 387 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 SLC17A5Q9NRA2 495 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 NSG2Q9Y328 171 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 CUL9Q8IWT3 2517 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 PLSCR5A0PG75 271 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 PRAMEF27A3QJZ7 478 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 HPNP05981 417 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 FGF2P09038 288 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 NFYBP25208 207 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 EGR3Q06889 387 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 MLC1Q15049 377 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 PRAMEF9Q5VWM5 478 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 GLIPR1L1Q6UWM5 242 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 ETFBKMTQ8IXQ9 262 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF683Q8IZ20 524 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 CCNL2Q96S94 520 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-211ENST00000513346 OR51M1Q9H341 326 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 AK3Q9UIJ7 227 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 C19orf53Q9UNZ5 99 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-211ENST00000513346 SEC16AO15027 2179 aa10.2□□□□□ -0.78
TCOF1-211ENST00000513346 TCAPO15273 167 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 CNOT4O95628 575 aaKnown RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 OPN1LWP04000 364 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 SERPINA7P05543 415 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 DCDP81605 110 aaKnown RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 DPTQ07507 201 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 NKAIN2Q5VXU1 208 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF660Q6AZW8 331 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 ASTLQ6HA08 431 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 FAM185AQ8N0U4 392 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 RCBTB1Q8NDN9 531 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 SLC39A7Q92504 469 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 EMG1Q92979 244 aaKnown RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 JAM3Q9BX67 310 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 BCO1Q9HAY6 547 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF286AQ9HBT8 521 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 ADGRL4Q9HBW9 690 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 ZFP92A6NM28 416 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 RAB27BO00194 218 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 ABCD4O14678 606 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 MBTPS2O43462 519 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 GALR3O60755 368 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 RPS18P62269 152 aaKnown RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 MIDNQ504T8 468 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 TRMT12Q53H54 448 aaKnown RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 PWWP2BQ6NUJ5 590 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF485Q8NCK3 441 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 TVP23CQ96ET8 276 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 GHRLQ9UBU3 117 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 TBC1D29Q9UFV1 150 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 SIGLEC7Q9Y286 467 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 QSER1Q2KHR3 1735 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 CACNA1HO95180 2353 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 ARID1AO14497 2285 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 A0A0B4J293 547 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 A0A1W2PPH5 198 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 C2CD4DB7Z1M9 353 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 F5H5K5 113 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 H7BYZ3 331 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 ZFPL1O95159 310 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 PI3P19957 117 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 GDF1P27539 372 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 AGFG1P52594 562 aaKnown RBP10.19□□□□□ -0.78
TCOF1-211ENST00000513346 TAS2R30P59541 319 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 PPP1R1AQ13522 171 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 OGFOD3Q6PK18 319 aa10.19□□□□□ -0.78
TCOF1-211ENST00000513346 TMPRSS11FQ6ZWK6 438 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms