RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 TBPL2Q6SJ96 375 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 IL34Q6ZMJ4 242 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 SFTPA2Q8IWL1 248 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 SFTPA1Q8IWL2 248 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 SYS1Q8N2H4 156 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ANKRD53Q8N9V6 530 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 LIN37Q96GY3 246 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 ADTRPQ96IZ2 230 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PECRQ9BY49 303 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 GPR84Q9NQS5 396 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 FSCN3Q9NQT6 498 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PRDM7Q9NQW5 492 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PLCXD1Q9NUJ7 323 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 TRAPPC4Q9Y296 219 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 A0A1W2PQD3 144 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ZNF785A8K8V0 405 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 K7EPK0 472 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 DNASE2O00115 360 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 SOCS6O14544 535 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 METTL15P1P0C7V9 234 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 CHATP28329 748 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 MPGP29372 298 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PMPCAQ10713 525 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 BEX5Q5H9J7 111 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 CST9LP1Q5W188 147 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 TIPARPQ7Z3E1 657 aaKnown RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 FAM71E2Q8N5Q1 922 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 C15orf54Q8N8G6 183 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR2M7Q8NG81 312 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 DNASE2BQ8WZ79 361 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PTP4A1Q93096 173 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ARSGQ96EG1 525 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 TEAD3Q99594 435 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PBOV1Q9GZY1 135 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 CPNE5Q9HCH3 593 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 FKBP11Q9NYL4 201 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PCOLCE2Q9UKZ9 415 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 A4GNTQ9UNA3 340 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 MN1Q10571 1320 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 TMEM82A0PJX8 343 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR5B21A6NL26 309 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 SPI1P17947 270 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 APEX1P27695 318 aaKnown RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 ZNF85Q03923 595 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 RBMS2Q15434 407 aaKnown RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 GLYATL3Q5SZD4 288 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OTUD1Q5VV17 481 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 CCDC144NLQ6NUI1 221 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 FJX1Q86VR8 437 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OSR2Q8N2R0 312 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 AKR7LQ8NHP1 331 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PFN4Q8NHR9 129 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 SLC25A40Q8TBP6 338 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ST8SIA2Q92186 375 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 FAM210AQ96ND0 272 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 FYTTD1Q96QD9 318 aaKnown RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 RASL11BQ9BPW5 248 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PSD2Q9BQI7 771 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PIMREGQ9BSJ6 248 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 CA10Q9NS85 328 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ARPC1BO15143 372 aaKnown RBP3.82□□□□□ -1.8
VCAN-209ENST00000513016 GPR37O15354 613 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 HYAL3O43820 417 aaPredicted RBP3.82□□□□□ -1.8
VCAN-209ENST00000513016 B4GALT3O60512 393 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 SELENOFO60613 162 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 OMGP23515 440 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 HAAOP46952 286 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 NPBWR1P48145 328 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 PGFP49763 221 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 NKX6-1P78426 367 aaPredicted RBP3.82□□□□□ -1.8
VCAN-209ENST00000513016 ZNF385BQ569K4 471 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 ZNF793Q6ZN11 406 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 NKAIN4Q8IVV8 208 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 RDH5Q92781 318 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 ALG14Q96F25 216 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 CNTNAP3BQ96NU0 1288 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 SLC25A21Q9BQT8 299 aaPredicted RBP3.82□□□□□ -1.8
VCAN-209ENST00000513016 NARFLQ9H6Q4 476 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 TUBG2Q9NRH3 451 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 MED29Q9NX70 200 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 SEMA7AO75326 666 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 PCSK6P29122 969 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 SPRED3Q2MJR0 410 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 OGFOD3Q6PK18 319 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 CCDC28AQ8IWP9 274 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 FAM181AQ8N9Y4 354 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 KDF1Q8NAX2 398 aaPredicted RBP3.82□□□□□ -1.8
VCAN-209ENST00000513016 DHRS9Q9BPW9 319 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 RAB33BQ9H082 229 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 ARV1Q9H2C2 271 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 CDK2AP1O14519 115 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 FGF5P12034 268 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 IL7P13232 177 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 TMEM11P17152 192 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 PDLIM4P50479 330 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 SLC35B1P78383 322 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 SLC17A1Q14916 467 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 SLC9A3R2Q15599 337 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 ALKBH6Q3KRA9 238 aa3.82□□□□□ -1.8
VCAN-209ENST00000513016 SLC25A30Q5SVS4 291 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms