RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 MS4A15Q8N5U1 240 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF676Q8N7Q3 588 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 CLEC18CQ8NCF0 446 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF485Q8NCK3 441 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 CPEB3Q8NE35 698 aaKnown RBP9.44□□□□□ -0.9
PFDN1-204ENST00000512707 OR5L1Q8NGL2 311 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 OR2G2Q8NGZ5 317 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 OR5AK2Q8NH90 309 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 SMIM19Q96E16 107 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 PGAM5Q96HS1 289 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 OPALINQ96PE5 141 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 C1QTNF6Q9BXI9 259 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 OR10A2Q9H208 303 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 NOX3Q9HBY0 568 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 BRD7Q9NPI1 651 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 CRNNQ9UBG3 495 aaPredicted RBP9.44□□□□□ -0.9
PFDN1-204ENST00000512707 NUFIP1Q9UHK0 495 aaKnown RBP9.44□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF391Q9UJN7 358 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 OR52A1Q9UKL2 312 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 GRIP1Q9Y3R0 1128 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 SPEF1Q9Y4P9 236 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 N6AMT1Q9Y5N5 214 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 ESPL1Q14674 2120 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 ICE1Q9Y2F5 2266 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 FREM1Q5H8C1 2179 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 PNMA8CA0A1B0GUJ8 204 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF503-AS2A6NEH8 195 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 TUBAL3A6NHL2 446 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 CASKO14936 926 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 OGG1O15527 345 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 TBX1O43435 398 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 PLPP2O43688 288 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 LCATP04180 440 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 CD1AP06126 327 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 ACSM4P0C7M7 580 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF12P17014 697 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 CFL1P23528 166 aaKnown RBP9.43□□□□□ -0.9
PFDN1-204ENST00000512707 GABRA5P31644 462 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 ALDH3B2P48448 385 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 GP2P55259 537 aaKnown RBP9.43□□□□□ -0.9
PFDN1-204ENST00000512707 SLC3A1Q07837 685 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 TMEM244Q5VVB8 128 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 FAM57BQ71RH2 274 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 CATSPERDQ86XM0 798 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 WFDC8Q8IUA0 241 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 C1orf174Q8IYL3 243 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 OR13F1Q8NGS4 319 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 APOBEC3DQ96AK3 386 aaPredicted RBP9.43□□□□□ -0.9
PFDN1-204ENST00000512707 ZC3HAV1LQ96H79 300 aaKnown RBP9.43□□□□□ -0.9
PFDN1-204ENST00000512707 POM121L2Q96KW2 1035 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 C4orf45Q96LM5 186 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 PBOV1Q9GZY1 135 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 RGCCQ9H4X1 137 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 OPA3Q9H6K4 179 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 BATF3Q9NR55 127 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 NDUFB11Q9NX14 153 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 FAM206AQ9NX38 181 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 NDUFA13Q9P0J0 144 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 MYO9AB2RTY4 2548 aa9.43□□□□□ -0.9
PFDN1-204ENST00000512707 LOC100509620A0A075B734 347 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 A0A1B0GVI7 797 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 E9PI62 339 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 XRCC2O43543 280 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 MTRF1O75570 445 aaKnown RBP9.42□□□□□ -0.9
PFDN1-204ENST00000512707 IGLV1-44P01699 117 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 HLA-DPB1P04440 258 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 DBHP09172 617 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 CECR9P0C854 216 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 CD36P16671 472 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 TUBG1P23258 451 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 PTAFRP25105 342 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 MAPK3P27361 379 aaPredicted RBP9.42□□□□□ -0.9
PFDN1-204ENST00000512707 RAD52P43351 418 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 GTF2A1P52655 376 aaPredicted RBP9.42□□□□□ -0.9
PFDN1-204ENST00000512707 MFGE8Q08431 387 aaPredicted RBP9.42□□□□□ -0.9
PFDN1-204ENST00000512707 GFOD2Q3B7J2 385 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 KRTAP27-1Q3LI81 207 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 YIF1BQ5BJH7 314 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 WDR38Q5JTN6 314 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 DMKNQ6E0U4 476 aaPredicted RBP9.42□□□□□ -0.9
PFDN1-204ENST00000512707 PAMR1Q6UXH9 720 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF584Q8IVC4 421 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 PHC2Q8IXK0 858 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 ELMOD2Q8IZ81 293 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 ZFP41Q8N8Y5 198 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 CCDC54Q8NEL0 328 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 SLC7A6Q92536 515 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 AKAP1Q92667 903 aaKnown RBP eCLIP9.42□□□□□ -0.92e-6■■■□□ 17
PFDN1-204ENST00000512707 GHSRQ92847 366 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 TMED9Q9BVK6 235 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 C1QTNF5Q9BXJ0 243 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 ESRP2Q9H6T0 727 aaKnown RBP9.42□□□□□ -0.9
PFDN1-204ENST00000512707 TUBG2Q9NRH3 451 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 FRRS1LQ9P0K9 344 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 ST6GALNAC2Q9UJ37 374 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF281Q9Y2X9 895 aa9.42□□□□□ -0.9
PFDN1-204ENST00000512707 IGHV1-18A0A0C4DH31 117 aa9.41□□□□□ -0.9
PFDN1-204ENST00000512707 A0A0U1RQV5 110 aa9.41□□□□□ -0.9
PFDN1-204ENST00000512707 CCDC160A6NGH7 325 aa9.41□□□□□ -0.9
PFDN1-204ENST00000512707 SRSF10O75494 262 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms