RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 NARFLQ9H6Q4 476 aa13.53□□□□□ -0.24
DDX41-214ENST00000512334 TREM2Q9NZC2 230 aa13.53□□□□□ -0.24
DDX41-214ENST00000512334 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.53□□□□□ -0.24
DDX41-214ENST00000512334 ABCA1O95477 2261 aa13.52□□□□□ -0.24
DDX41-214ENST00000512334 H3BNX3 289 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 M0R129 80 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 PRKYO43930 277 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 RP2O75695 350 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 ZNF16P17020 682 aaPredicted RBP13.52□□□□□ -0.25
DDX41-214ENST00000512334 EPHA2P29317 976 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 CRYBB2P43320 205 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 GZMKP49863 264 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 PRSS12P56730 875 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 TMEM33P57088 247 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 GRB2P62993 217 aaKnown RBP13.52□□□□□ -0.25
DDX41-214ENST00000512334 HFEQ30201 348 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 SLX4IPQ5VYV7 408 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 DRAM2Q6UX65 266 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 Q6ZR03 302 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 PGAP1Q75T13 922 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 MRPL21Q7Z2W9 205 aaKnown RBP13.52□□□□□ -0.25
DDX41-214ENST00000512334 BHLHE23Q8NDY6 225 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 THEM6Q8WUY1 208 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 CCL17Q92583 94 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 RBM4BQ9BQ04 359 aaKnown RBP13.52□□□□□ -0.25
DDX41-214ENST00000512334 ABHD6Q9BV23 337 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 RIBC2Q9H4K1 309 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 MARCH7Q9H992 704 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 CACNG2Q9Y698 323 aa13.52□□□□□ -0.25
DDX41-214ENST00000512334 ZANQ9Y493 2812 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 YLPM1P49750 1951 aaKnown RBP13.51□□□□□ -0.25
DDX41-214ENST00000512334 ZAR1LA6NP61 321 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 TLX2O43763 284 aaPredicted RBP13.51□□□□□ -0.25
DDX41-214ENST00000512334 LILRA1O75019 489 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 ANXA2P07355 339 aaKnown RBP13.51□□□□□ -0.25
DDX41-214ENST00000512334 LYNP07948 512 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 ADH4P08319 380 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 TACSTD2P09758 323 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 SLC2A1P11166 492 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 SELEP16581 610 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 OTX1P32242 354 aaPredicted RBP13.51□□□□□ -0.25
DDX41-214ENST00000512334 CX3CR1P49238 355 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 CDK5R2Q13319 367 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 GK2Q14410 553 aaPredicted RBP13.51□□□□□ -0.25
DDX41-214ENST00000512334 SNAI3Q3KNW1 292 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 C6orf52Q5T4I8 152 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 AVPI1Q5T686 147 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 LCN1P1Q5VSP4 162 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 TCEANCQ8N8B7 351 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 OR8G5Q8NG78 346 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 OSBPL10Q9BXB5 764 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 TOR3AQ9H497 397 aa13.51□□□□□ -0.25
DDX41-214ENST00000512334 H2AFY2Q9P0M6 372 aaPredicted RBP13.51□□□□□ -0.25
DDX41-214ENST00000512334 TMEFF2Q9UIK5 374 aaPredicted RBP13.51□□□□□ -0.25
DDX41-214ENST00000512334 IQCF6A8MYZ5 107 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 CLDN25C9JDP6 229 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 TBX1O43435 398 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 CD55P08174 381 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 MRPL3P09001 348 aaKnown RBP13.5□□□□□ -0.25
DDX41-214ENST00000512334 H2BFMP0C1H6 154 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 SLC2A5P22732 501 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 POLR2IP36954 125 aaKnown RBP13.5□□□□□ -0.25
DDX41-214ENST00000512334 MVKQ03426 396 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 SPRNQ5BIV9 151 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 C12orf73Q69YU5 71 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 ZNF454Q8N9F8 522 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 OR10AD1Q8NGE0 317 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 OR13G1Q8NGZ3 307 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 OR2AE1Q8NHA4 323 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 OTOSQ8NHW6 89 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 RNF133Q8WVZ7 376 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 SPRYD4Q8WW59 207 aaPredicted RBP13.5□□□□□ -0.25
DDX41-214ENST00000512334 TIMD4Q96H15 378 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 IL4I1Q96RQ9 567 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 AMELYQ99218 206 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 DNAJC27Q9NZQ0 273 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 ORC6Q9Y5N6 252 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 TLN2Q9Y4G6 2542 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 HIVEP2P31629 2446 aa13.5□□□□□ -0.25
DDX41-214ENST00000512334 C2CD3Q4AC94 2353 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 LOC100289279A0A1B0GTE1 492 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 CCDC182A6NF36 153 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 A8MV72 311 aaPredicted RBP13.49□□□□□ -0.25
DDX41-214ENST00000512334 TNFRSF1AP19438 455 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 IL2RGP31785 369 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 ZNF92Q03936 586 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 GLYATL3Q5SZD4 288 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 BCDIN3DQ7Z5W3 292 aaKnown RBP13.49□□□□□ -0.25
DDX41-214ENST00000512334 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.49□□□□□ -0.25
DDX41-214ENST00000512334 TMEM163Q8TC26 289 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 ITLN1Q8WWA0 313 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 OR2V2Q96R30 315 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 TEAD3Q99594 435 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 GABARAPL3Q9BY60 117 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 S100A14Q9HCY8 104 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 BRD7Q9NPI1 651 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 TMEM100Q9NV29 134 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 LAMP5Q9UJQ1 280 aa13.49□□□□□ -0.25
DDX41-214ENST00000512334 C5orf63A6NC05 138 aa13.48□□□□□ -0.25
DDX41-214ENST00000512334 GGT3PA6NGU5 568 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms