RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 RSPO1Q2MKA7 263 aaPredicted RBP4.66□□□□□ -1.66
PROM1-211ENST00000511153 SNAI3Q3KNW1 292 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 TMEM255AQ5JRV8 349 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 SLC35D3Q5M8T2 416 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 C6orf141Q5SZD1 244 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 NCMAPQ5T1S8 102 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 TMEM108Q6UXF1 575 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 USP51Q70EK9 711 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 COMMD2Q86X83 199 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.66□□□□□ -1.66
PROM1-211ENST00000511153 STX19Q8N4C7 294 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 C17orf78Q8N4C9 275 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 ZNF540Q8NDQ6 660 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 BHLHE23Q8NDY6 225 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 GJC3Q8NFK1 279 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 OR1J1Q8NGS3 322 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 LILRB1Q8NHL6 650 aaPredicted RBP4.66□□□□□ -1.66
PROM1-211ENST00000511153 ST7LQ8TDW4 575 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 FAM222BQ8WU58 562 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 SNX33Q8WV41 574 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 NINJ1Q92982 152 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 DVL3Q92997 716 aaPredicted RBP4.66□□□□□ -1.66
PROM1-211ENST00000511153 POM121L2Q96KW2 1035 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 C4orf36Q96KX1 117 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 ATF6BQ99941 703 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 PPP1R3EQ9H7J1 279 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 C8orf4Q9NR00 106 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 ACOXLQ9NUZ1 547 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 TREM2Q9NZC2 230 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 MYEF2Q9P2K5 600 aaKnown RBP4.66□□□□□ -1.66
PROM1-211ENST00000511153 WARS2Q9UGM6 360 aaKnown RBP4.66□□□□□ -1.66
PROM1-211ENST00000511153 DUSP13Q9UII6 198 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 SLC22A13Q9Y226 551 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 STARD10Q9Y365 291 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 RNF115Q9Y4L5 304 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 LRP12Q9Y561 859 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 FBN2P35556 2912 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 DSCAMO60469 2012 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 POLQO75417 2590 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 SPG11Q96JI7 2443 aa4.66□□□□□ -1.66
PROM1-211ENST00000511153 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 A0A1W2PPW3 197 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 LMX1BO60663 402 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 TMCC2O75069 709 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 LY6HO94772 140 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 FADS2O95864 444 aaKnown RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 IGKV3-15P01624 115 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 IGLV1-44P01699 117 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 MT-ND2P03891 347 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 ACSM4P0C7M7 580 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 PPP3CBP16298 524 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 ALOX5APP20292 161 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 MYF6P23409 242 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 C21orf33P30042 268 aaPredicted RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 ALDH3B1P43353 468 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 MAGEB1P43366 347 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 HSPA13P48723 471 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 GTF2A1P52655 376 aaPredicted RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 LSM6P62312 80 aaKnown RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 ST3GAL4Q11206 333 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 BEX5Q5H9J7 111 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 XAF1Q6GPH4 301 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 ZNF322Q6U7Q0 402 aaPredicted RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 ZNF627Q7L945 461 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 P2RY8Q86VZ1 359 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 RDH10Q8IZV5 341 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 OTOSQ8NHW6 89 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 SLC25A40Q8TBP6 338 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 SPRYD4Q8WW59 207 aaPredicted RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 TRUB1Q8WWH5 349 aaKnown RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 RFKQ969G6 155 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 PGAM5Q96HS1 289 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 FAM71F1Q96KD3 344 aaPredicted RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 C4orf45Q96LM5 186 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 ALG8Q9BVK2 526 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 ANKRD60Q9BZ19 345 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 OR2J1Q9GZK6 312 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 TPK1Q9H3S4 243 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 ESRP2Q9H6T0 727 aaKnown RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 MARCH7Q9H992 704 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 CISD1Q9NZ45 108 aaKnown RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 ZNF319Q9P2F9 582 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 MRM2Q9UI43 246 aaKnown RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.65□□□□□ -1.66
PROM1-211ENST00000511153 PLEKHA6Q9Y2H5 1048 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 RPL36Q9Y3U8 105 aaKnown RBP4.65□□□□□ -1.66
PROM1-211ENST00000511153 ABCA12Q86UK0 2595 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 CSMD2Q7Z408 3487 aa4.65□□□□□ -1.66
PROM1-211ENST00000511153 OR6C6A6NF89 314 aa4.65□□□□□ -1.67
PROM1-211ENST00000511153 ZNF878C9JN71 531 aa4.65□□□□□ -1.67
PROM1-211ENST00000511153 M0R135 149 aa4.65□□□□□ -1.67
PROM1-211ENST00000511153 P2RY10O00398 339 aa4.65□□□□□ -1.67
PROM1-211ENST00000511153 MPZL2O60487 215 aa4.65□□□□□ -1.67
PROM1-211ENST00000511153 SMPD2O60906 423 aa4.65□□□□□ -1.67
PROM1-211ENST00000511153 CTAG2O75638 210 aa4.65□□□□□ -1.67
PROM1-211ENST00000511153 PNPP00491 289 aa4.65□□□□□ -1.67
PROM1-211ENST00000511153 LALBAP00709 142 aa4.65□□□□□ -1.67
PROM1-211ENST00000511153 SOD3P08294 240 aa4.65□□□□□ -1.67
PROM1-211ENST00000511153 LIMS3P0CW19 117 aa4.65□□□□□ -1.67
PROM1-211ENST00000511153 LIMS4P0CW20 117 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms