RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SMPD3Q9NY59 655 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-213ENST00000509357 ZNF319Q9P2F9 582 aa7.47□□□□□ -1.21
PDLIM5-213ENST00000509357 CDC42EP3Q9UKI2 254 aa7.47□□□□□ -1.21
PDLIM5-213ENST00000509357 SONP18583 2426 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-213ENST00000509357 ABCA2Q9BZC7 2435 aa7.47□□□□□ -1.21
PDLIM5-213ENST00000509357 ABCA1O95477 2261 aa7.47□□□□□ -1.21
PDLIM5-213ENST00000509357 LRP5LA4QPB2 252 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 C17orf100A8MU93 164 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 PSMD9O00233 223 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 PRODHO43272 600 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 PPIHO43447 177 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 SGCEO43556 437 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 LMX1BO60663 402 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 ICMTO60725 284 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 CDC14BO60729 498 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 LILRA1O75019 489 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 ABHD16AO95870 558 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 HPXP02790 462 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 SPARCP09486 303 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF250P15622 560 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 GIFP27352 417 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 MPV17P39210 176 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 MAGEB1P43366 347 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 GPR6P46095 362 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 ISL1P61371 349 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 PPP1CBP62140 327 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 CCL8P80075 99 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 RIPK1Q13546 671 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 TSTQ16762 297 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 PCGF3Q3KNV8 242 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 SNAI3Q3KNW1 292 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 SPRNQ5BIV9 151 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 TEX30Q5JUR7 227 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF691Q5VV52 312 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 NXNL2Q5VZ03 156 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 SPATC1Q76KD6 591 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 MEPCEQ7L2J0 689 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 DCXRQ7Z4W1 244 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 SYT9Q86SS6 491 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 PRIMA1Q86XR5 153 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 OR6N2Q8NGY6 317 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 OR1F12Q8NHA8 337 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 RHOXF1Q8NHV9 184 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 CNIH3Q8TBE1 160 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 SLC25A40Q8TBP6 338 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 FBLIM1Q8WUP2 373 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 SGCDQ92629 289 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 C4orf45Q96LM5 186 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 INTS14Q96SY0 518 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 SOX7Q9BT81 388 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 ABHD6Q9BV23 337 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 NARFLQ9H6Q4 476 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 DDX28Q9NUL7 540 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 PLEK2Q9NYT0 353 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 GRIP1Q9Y3R0 1128 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 SVEP1Q4LDE5 3571 aa7.46□□□□□ -1.22
PDLIM5-213ENST00000509357 KIAA1324LA8MWY0 1029 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 SPRY3O43610 288 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 RRP9O43818 475 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 TIMM8AO60220 97 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 SRSF10O75494 262 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 HLA-DQA2P01906 255 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 ACSM4P0C7M7 580 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 COX5BP10606 129 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 ALOX5APP20292 161 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 HNF1AP20823 631 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 ACHEP22303 614 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 COL8A2P25067 703 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 FMO3P31513 532 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 OPRL1P41146 370 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF81P51508 661 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 RAD23AP54725 363 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 TMEM33P57088 247 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 SNRPGP62308 76 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 MVKQ03426 396 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF85Q03923 595 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 SLC35D3Q5M8T2 416 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 ELFN2Q5R3F8 820 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 SLC25A30Q5SVS4 291 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 ZNF684Q5T5D7 378 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 PLEKHG7Q6ZR37 379 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 COLCA1Q6ZS62 124 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 C1orf174Q8IYL3 243 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 PACRGLQ8N7B6 248 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 OR8J1Q8NGP2 316 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 OTOSQ8NHW6 89 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 KLF14Q8TD94 323 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 TFAP2CQ92754 450 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 PPP1R14AQ96A00 147 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 MSI2Q96DH6 328 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 SLAMF6Q96DU3 332 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 MARS2Q96GW9 593 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 WACQ9BTA9 647 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 ADI1Q9BV57 179 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 CDADC1Q9BWV3 514 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 OR2J1Q9GZK6 312 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 AMBNQ9NP70 447 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 CYSLTR2Q9NS75 346 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 LPAR3Q9UBY5 353 aa7.45□□□□□ -1.22
PDLIM5-213ENST00000509357 STARD10Q9Y365 291 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms