RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 OTULINQ96BN8 352 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 SLAMF6Q96DU3 332 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 ZNF582Q96NG8 517 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 KCNJ15Q99712 375 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 SLC25A19Q9HC21 320 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 PAPOLBQ9NRJ5 636 aaKnown RBP13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 IL19Q9UHD0 177 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 A0A1B0GWJ7 208 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 IQCF6A8MYZ5 107 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 M0R135 149 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 MITFO75030 526 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 ZNF16P17020 682 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 PRKXP51817 358 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 CDH15P55291 814 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 EFNB1P98172 346 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 MVKQ03426 396 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 AVPI1Q5T686 147 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 DRAM2Q6UX65 266 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 RHOUQ7L0Q8 258 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 RAB1CQ92928 201 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 ZMYND19Q96E35 227 aaPredicted RBP13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 ZNF799Q96GE5 643 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 INTS14Q96SY0 518 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 SLC30A2Q9BRI3 323 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 ABHD6Q9BV23 337 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 REPIN1Q9BWE0 567 aaKnown RBP13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 TMEM100Q9NV29 134 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 TVP23BQ9NYZ1 205 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 WIPI2Q9Y4P8 454 aa13.65□□□□□ -0.22
PDLIM5-212ENST00000509333 DYSFO75923 2080 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 KIAA1324LA8MWY0 1029 aaPredicted RBP13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 FAM157AC9JC47 383 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 H0YL77 283 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 SELEP16581 610 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 PAICSP22234 425 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 SLC2A5P22732 501 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 TNFSF4P23510 183 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 IGFBP5P24593 272 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 EPHA2P29317 976 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 RBMXP38159 391 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 ESRRGP62508 458 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 MALLQ13021 153 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 HNRNPA0Q13151 305 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 TAF13Q15543 124 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 SNAPC1Q16533 368 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 SNAI3Q3KNW1 292 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 CHRFAM7AQ494W8 412 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 KDM4DQ6B0I6 523 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 CCDC121Q6ZUS5 278 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 SHFQ7M4L6 423 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 ERI1Q8IV48 349 aaKnown RBP13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 ITLN1Q8WWA0 313 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 AMELYQ99218 206 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 TEAD3Q99594 435 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 BEX2Q9BXY8 128 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 NARFLQ9H6Q4 476 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 DCAF16Q9NXF7 216 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 KCNS2Q9ULS6 477 aa13.64□□□□□ -0.23
PDLIM5-212ENST00000509333 ATRQ13535 2644 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 B4DSR2 109 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 CLDN25C9JDP6 229 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 MLNRO43193 412 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 CIB2O75838 187 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 FCGR1AP12314 374 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 TNFRSF1AP19438 455 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 SLC15A1P46059 708 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 PRSS12P56730 875 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 ACTR3P61158 418 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 ZNF92Q03936 586 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 SLC3A1Q07837 685 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 EIF2B1Q14232 305 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 KLHL12Q53G59 568 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 PGAP1Q75T13 922 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 SPATC1Q76KD6 591 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 PRSS45Q7RTY3 260 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 ZDHHC13Q8IUH4 622 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 ZNF283Q8N7M2 679 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 BBS1Q8NFJ9 593 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 RNF133Q8WVZ7 376 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 SGK3Q96BR1 496 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 CENPNQ96H22 339 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 OR2V2Q96R30 315 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 COPS4Q9BT78 406 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 TEX12Q9BXU0 123 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 GABARAPL1Q9H0R8 117 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 CDC42EP3Q9UKI2 254 aa13.63□□□□□ -0.23
PDLIM5-212ENST00000509333 CD300LBA8K4G0 201 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 PRODHO43272 600 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 OPRL1P41146 370 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 SLC6A9P48067 706 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 HCCSP53701 268 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 DVL1P1P54792 670 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 SLC35D3Q5M8T2 416 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 GLYATL3Q5SZD4 288 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 FAM120AOSQ5T036 256 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 ZNF454Q8N9F8 522 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 OR6N2Q8NGY6 317 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 OTOSQ8NHW6 89 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 TIMD4Q96H15 378 aa13.62□□□□□ -0.23
PDLIM5-212ENST00000509333 PLEKHA8Q96JA3 519 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms