RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 LNX2Q8N448 690 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 ZNF283Q8N7M2 679 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 ZNF511Q8NB15 262 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 OR2T33Q8NG76 320 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 OR6K6Q8NGW6 343 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 BCAS4Q8TDM0 211 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 ST7LQ8TDW4 575 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 CANT1Q8WVQ1 401 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 SLCO4A1Q96BD0 722 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 DDOQ99489 341 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 FEVQ99581 238 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 C19orf24Q9BVV8 132 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 CHID1Q9BWS9 393 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 HCAR1Q9BXC0 346 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 C1QTNF5Q9BXJ0 243 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 DGCR6LQ9BY27 220 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 MED20Q9H944 212 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 G6PC2Q9NQR9 355 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 COMMD3-BMI1R4GMX3 469 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 STAB1Q9NY15 2570 aa12.49□□□□□ -0.41
UBE2D3-228ENST00000508974 WNK2Q9Y3S1 2297 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 A0A0G2JMP0 313 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 A0A0X1KG70 313 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 FAM183AA6NL82 134 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 H3BN98 237 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 M0R135 149 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 TCF21O43680 179 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 CYB5R3P00387 301 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 SPI1P17947 270 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 MMP16P51512 607 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 TPTEP56180 551 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 SEC61A1P61619 476 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 BTG1P62324 171 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 ECH1Q13011 328 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 MALLQ13021 153 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 GK2Q14410 553 aaPredicted RBP12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 ZMYND11Q15326 602 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 SNAI3Q3KNW1 292 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 KRTAP27-1Q3LI81 207 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 TMEM179BQ7Z7N9 219 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 MOGAT3Q86VF5 341 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 SPATA24Q86W54 205 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 OR4M2Q8NGB6 313 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 OR13G1Q8NGZ3 307 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 OR2AE1Q8NHA4 323 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 TEX47Q8TBZ9 253 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 GIPC3Q8TF64 312 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 ZNF799Q96GE5 643 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 MEGF10Q96KG7 1140 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 SIGLEC11Q96RL6 698 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 COPS4Q9BT78 406 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 RBM4Q9BWF3 364 aaKnown RBP12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 C1orf21Q9H246 121 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 GCM1Q9NP62 436 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 CENPMQ9NSP4 180 aa12.48□□□□□ -0.41
UBE2D3-228ENST00000508974 DHRS12A0PJE2 317 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 C5orf63A6NC05 138 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 RIIAD1A6NNX1 92 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 IQCF6A8MYZ5 107 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 GYG2O15488 501 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 SLC2A1P11166 492 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 POU1F1P28069 291 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 FMO3P31513 532 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 ENTPD1P49961 510 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 PRKXP51817 358 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 TAF13Q15543 124 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 LIPNQ5VXI9 398 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 COLCA1Q6ZS62 124 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 PGAP1Q75T13 922 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 MRPL21Q7Z2W9 205 aaKnown RBP12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 HS3ST5Q8IZT8 346 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 KLHL36Q8N4N3 616 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 RFLNBQ8N5W9 214 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 SPTSSAQ969W0 71 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 SLAMF6Q96DU3 332 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 SLC30A2Q9BRI3 323 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 TMPRSS13Q9BYE2 586 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 TMEM100Q9NV29 134 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 KCNG2Q9UJ96 466 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 BAIAP2Q9UQB8 552 aa12.47□□□□□ -0.41
UBE2D3-228ENST00000508974 TMEM178BH3BS89 294 aa12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 ZNF593O00488 134 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 E2F6O75461 281 aa12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 IFNGP01579 166 aa12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 ZNF3P17036 446 aa12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 ZFP36P26651 326 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 SRP9P49458 86 aaKnown RBP12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 FLOT2Q14254 428 aa12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 SLC27A4Q6P1M0 643 aa12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 SPICQ8N5J4 248 aa12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 SPRYD4Q8WW59 207 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 DVL3Q92997 716 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 NMNAT2Q9BZQ4 307 aa12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 PDP1Q9P0J1 537 aaPredicted RBP12.46□□□□□ -0.41
UBE2D3-228ENST00000508974 AQP12BA6NM10 295 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 CA6P23280 308 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 ZNF92Q03936 586 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 EIF2B1Q14232 305 aaKnown RBP12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 DNAL1Q4LDG9 190 aa12.45□□□□□ -0.42
UBE2D3-228ENST00000508974 FAM201AQ5SY85 155 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms