RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 LIN54Q6MZP7 749 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 NHLRC1Q6VVB1 395 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 RAB11FIP2Q7L804 512 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 TIPARPQ7Z3E1 657 aaKnown RBP9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF248Q8NDW4 579 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 OR51A4Q8NGJ6 313 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 OR52B4Q8NGK2 314 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 OR1J4Q8NGS1 313 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 SEH1LQ96EE3 360 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 FOXN4Q96NZ1 517 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 SHARPINQ9H0F6 387 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 FXYD6Q9H0Q3 95 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 CDCP1Q9H5V8 836 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 TMEM185BQ9H7F4 350 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 HHLA2Q9UM44 414 aa9.82□□□□□ -0.84
SH3RF1-203ENST00000508685 LAMA5O15230 3695 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 IGLV1-36A0A0B4J1U3 117 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 A0A1W2PNU3 283 aaPredicted RBP9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 TMEM82A0PJX8 343 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 METTL21EPA6NDL7 271 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 DISC1C4P0D8 188 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 WDPCPO95876 746 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 CD74P04233 296 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 OR4E1P0C645 316 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 TCN2P20062 427 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 MPZP25189 248 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 APOBEC1P41238 236 aaKnown RBP9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 EFNB2P52799 333 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 EXT1Q16394 746 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 PLPPR5Q32ZL2 321 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 TMEM244Q5VVB8 128 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 ADGRE4PQ86SQ3 457 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 COQ8AQ8NI60 647 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 ASB5Q8WWX0 329 aa9.81□□□□□ -0.84
SH3RF1-203ENST00000508685 A0A087WV48 116 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 NSG1A0A0A6YYJ2 146 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 SLC22A23A1A5C7 686 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 H0YC42 278 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 DOK2O60496 412 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 SLC16A7O60669 478 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 CYB5AP00167 134 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 SPARCP09486 303 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 DNASE1L1P49184 302 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 ADAM8P78325 824 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF345Q14585 488 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 C1orf100Q5SVJ3 147 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 NDUFAF7Q7L592 441 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 WDFY1Q8IWB7 410 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 WDSUB1Q8N9V3 476 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 OR52N5Q8NH56 324 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 POC1BQ8TC44 478 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 PCNPQ8WW12 178 aaKnown RBP9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 AMELYQ99218 206 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 PRRT1Q99946 306 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 EDEM2Q9BV94 578 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 TCFL5Q9UL49 500 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 PADI1Q9ULC6 663 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 R4GMQ9 66 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 SDK2Q58EX2 2172 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 EML6Q6ZMW3 1958 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 IGLV3-32A0A0A0MS00 114 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 LOC390937A0A1W2PQ73 354 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 NPIPB13A6NJU9 1138 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF736B4DX44 427 aaPredicted RBP9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 C9orf172C9J069 976 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 NPIPB4C9JG80 1138 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 G3V3Y1 287 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 ETV2O00321 342 aaPredicted RBP9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 LDLRAD4O15165 306 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 SCO1O75880 301 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 OR2F2O95006 317 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 JMJD7P0C870 316 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 SLC25A4P12235 298 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 ZNF823P16415 610 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 HLA-GP17693 338 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 SDHBP21912 280 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 MPGP29372 298 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 OTX2P32243 289 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 GSK3AP49840 483 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 GUCA2AQ02747 115 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 ZP4Q12836 540 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 PLA2G7Q13093 441 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 OR2F1Q13607 317 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 EIF2B1Q14232 305 aaKnown RBP9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 OR7E24Q6IFN5 339 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 FAHD2BQ6P2I3 314 aaPredicted RBP9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 ALKAL2Q6UX46 152 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 BVESQ8NE79 360 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 OR2M3Q8NG83 312 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 OR4D10Q8NGI6 311 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 CT55Q8WUE5 264 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 PHYHIPLQ96FC7 376 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 FAHD2AQ96GK7 314 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 SLC25A44Q96H78 314 aaPredicted RBP9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 NUDT16L1Q9BRJ7 211 aaKnown RBP9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 ABHD6Q9BV23 337 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 STRADBQ9C0K7 418 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 POFUT1Q9H488 388 aa9.8□□□□□ -0.84
SH3RF1-203ENST00000508685 MRPL22Q9NWU5 206 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms