RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 GTF3AQ92664 365 aaKnown RBP16.87■□□□□ 0.29
SFXN1-209ENST00000508290 SLAMF6Q96DU3 332 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 KCNJ15Q99712 375 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 OSBPL10Q9BXB5 764 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 BEX2Q9BXY8 128 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 SLC22A4Q9H015 551 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 SHARPINQ9H0F6 387 aa16.87■□□□□ 0.29
SFXN1-209ENST00000508290 FAM183AA6NL82 134 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 G3V2T6 193 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 FAM157CP0CG43 387 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 PRKACGP22612 351 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 SLC6A9P48067 706 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 DVL1P1P54792 670 aaPredicted RBP16.86■□□□□ 0.29
SFXN1-209ENST00000508290 ACSM5Q6NUN0 579 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 CCDC121Q6ZUS5 278 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 C10orf67Q8IYJ2 551 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 HS3ST5Q8IZT8 346 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 OR10S1Q8NGN2 331 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 ST7LQ8TDW4 575 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 CCL17Q92583 94 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 OTULINQ96BN8 352 aa16.86■□□□□ 0.29
SFXN1-209ENST00000508290 A0A1B0GWJ7 208 aa16.85■□□□□ 0.29
SFXN1-209ENST00000508290 CLUP10909 449 aa16.85■□□□□ 0.29
SFXN1-209ENST00000508290 SRP9P49458 86 aaKnown RBP16.85■□□□□ 0.29
SFXN1-209ENST00000508290 CRISP1P54107 249 aa16.85■□□□□ 0.29
SFXN1-209ENST00000508290 GK2Q14410 553 aaPredicted RBP16.85■□□□□ 0.29
SFXN1-209ENST00000508290 HLXQ14774 488 aaPredicted RBP16.85■□□□□ 0.29
SFXN1-209ENST00000508290 OR2T2Q6IF00 324 aa16.85■□□□□ 0.29
SFXN1-209ENST00000508290 PLBD1Q6P4A8 553 aa16.85■□□□□ 0.29
SFXN1-209ENST00000508290 PGAP1Q75T13 922 aa16.85■□□□□ 0.29
SFXN1-209ENST00000508290 ASRGL1Q7L266 308 aa16.85■□□□□ 0.29
SFXN1-209ENST00000508290 MRPL21Q7Z2W9 205 aaKnown RBP16.85■□□□□ 0.29
SFXN1-209ENST00000508290 OR6N2Q8NGY6 317 aa16.85■□□□□ 0.29
SFXN1-209ENST00000508290 SLC30A2Q9BRI3 323 aa16.85■□□□□ 0.29
SFXN1-209ENST00000508290 GABARAPL1Q9H0R8 117 aa16.85■□□□□ 0.29
SFXN1-209ENST00000508290 WIPI2Q9Y4P8 454 aa16.85■□□□□ 0.29
SFXN1-209ENST00000508290 SONP18583 2426 aaKnown RBP16.84■□□□□ 0.29
SFXN1-209ENST00000508290 XRCC2O43543 280 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 THBS2P35442 1172 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 ERFP50548 548 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 DBPQ10586 325 aaPredicted RBP16.84■□□□□ 0.29
SFXN1-209ENST00000508290 CCNIQ14094 377 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 EIF2B1Q14232 305 aaKnown RBP16.84■□□□□ 0.29
SFXN1-209ENST00000508290 LYPD4Q6UWN0 246 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 Q6ZR03 302 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 GLCCI1Q86VQ1 547 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 ERI1Q8IV48 349 aaKnown RBP16.84■□□□□ 0.29
SFXN1-209ENST00000508290 TIGD4Q8IY51 512 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 TEX29Q8N6K0 151 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 ZNF283Q8N7M2 679 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 CELF2-AS1Q8N7Q2 184 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 OR51F2Q8NH61 342 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 RNF133Q8WVZ7 376 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 OR51V1Q9H2C8 321 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 KRT84Q9NSB2 600 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 CENPMQ9NSP4 180 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 TMEM106BQ9NUM4 274 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 TMEM100Q9NV29 134 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 PPP1R3CQ9UQK1 317 aa16.84■□□□□ 0.29
SFXN1-209ENST00000508290 CHD3Q12873 2000 aaKnown RBP16.84■□□□□ 0.29
SFXN1-209ENST00000508290 MSMBP08118 114 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 CFL1P23528 166 aaKnown RBP16.83■□□□□ 0.28
SFXN1-209ENST00000508290 CPT2P23786 658 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 IGFBP5P24593 272 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 HSD11B1P28845 292 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 IL2RGP31785 369 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 RPS27P42677 84 aaKnown RBP16.83■□□□□ 0.28
SFXN1-209ENST00000508290 LMO4P61968 165 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 SNAPC1Q16533 368 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 LCN1P1Q5VSP4 162 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 DPY19L4Q7Z388 723 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 CPOQ8IVL8 374 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 OR52H1Q8NGJ2 320 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 SPRYD4Q8WW59 207 aaPredicted RBP16.83■□□□□ 0.28
SFXN1-209ENST00000508290 ERGIC1Q969X5 290 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 OR2V2Q96R30 315 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 ZNF665Q9H7R5 613 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 MED20Q9H944 212 aa16.83■□□□□ 0.28
SFXN1-209ENST00000508290 DDOSTP39656 456 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 DAPP51397 102 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 RAD23AP54725 363 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 MVKQ03426 396 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 PTGES3Q15185 160 aaKnown RBP16.82■□□□□ 0.28
SFXN1-209ENST00000508290 SNCBQ16143 134 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 ZNF181Q2M3W8 571 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 FAM120AOSQ5T036 256 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 CXXC5Q7LFL8 322 aaKnown RBP16.82■□□□□ 0.28
SFXN1-209ENST00000508290 KLBQ86Z14 1044 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 OR5AS1Q8N127 324 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 SPICQ8N5J4 248 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 OTOSQ8NHW6 89 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 CENPNQ96H22 339 aaPredicted RBP16.82■□□□□ 0.28
SFXN1-209ENST00000508290 GAL3ST1Q99999 423 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 SOX7Q9BT81 388 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 ABHD6Q9BV23 337 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 REPIN1Q9BWE0 567 aaKnown RBP16.82■□□□□ 0.28
SFXN1-209ENST00000508290 RGCCQ9H4X1 137 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 NIPAL2Q9H841 368 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 NPTNQ9Y639 398 aa16.82■□□□□ 0.28
SFXN1-209ENST00000508290 CACNG2Q9Y698 323 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms