RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 ARG1P05089 322 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 MX1P20591 662 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 BMI1P35226 326 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 GALR1P47211 349 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 GZMMP51124 257 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 UBE2E1P51965 193 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 GBX2P52951 348 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 BST1Q10588 318 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 SLC25A35Q3KQZ1 300 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 C12orf54Q6X4T0 127 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 N4BP2L2Q92802 583 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 TMEM159Q96B96 161 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 NUDT9Q9BW91 350 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 SLC17A7Q9P2U7 560 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 COMMD3-BMI1R4GMX3 469 aa1.13□□□□□ -2.23
HMGB1P29-201ENST00000505659 RPRD2Q5VT52 1461 aaKnown RBP1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 A0A1B0GUH1 482 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 SDHAF1A6NFY7 115 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 PRAMEF26H0Y7S4 382 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 NDC80O14777 642 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 CDC40O60508 579 aaKnown RBP eCLIP1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 NMT2O60551 498 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 IGLV7-43P04211 117 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 RPN2P04844 631 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 TALDO1P37837 337 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 NAA10P41227 235 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 NDUFA8P51970 172 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 TAS2R46P59540 309 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 PNOCQ13519 176 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 CHRNA6Q15825 494 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 LUZP6Q538Z0 58 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 PYDC2Q56P42 97 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 DAZ4Q86SG3 579 aaKnown RBP1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 NT5DC3Q86UY8 548 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 FAM71AQ8IYT1 594 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 ZCCHC7Q8N3Z6 543 aaKnown RBP1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 EIF1ADQ8N9N8 165 aaKnown RBP1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 SPATA4Q8NEY3 305 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 OR2Z1Q8NG97 314 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 NUBPLQ8TB37 319 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 APH1BQ8WW43 257 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 RNF145Q96MT1 663 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 C1orf50Q9BV19 199 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 ANKRD60Q9BZ19 345 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 MYOZ1Q9NP98 299 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 MED4Q9NPJ6 270 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 DAZ1Q9NQZ3 744 aaKnown RBP1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 HRASLS2Q9NWW9 162 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 PSMC3IPQ9P2W1 217 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 PISDQ9UG56 409 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 LGALS13Q9UHV8 139 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 FARSAQ9Y285 508 aaKnown RBP1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 PCDH11XQ9BZA7 1347 aa1.12□□□□□ -2.23
HMGB1P29-201ENST00000505659 PRR14LQ5THK1 2151 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 SMCO2A6NFE2 343 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 LYRM9A8MSI8 78 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 CLDN34H7C241 214 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 TNFRSF11BO00300 401 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 CD70P32970 193 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 HNMTP50135 292 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 STXBP1P61764 594 aaKnown RBP1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 SP4Q02446 784 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 SLC9A3R2Q15599 337 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 TMEM69Q5SWH9 247 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 NPSR1Q6W5P4 371 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 Q8NDZ9 215 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 OR10G6Q8NH81 332 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 OR51E1Q8TCB6 317 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 KCNS1Q96KK3 526 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 TAS2R5Q9NYW4 299 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 BLOC1S6Q9UL45 172 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 NACADO15069 1562 aa1.11□□□□□ -2.23
HMGB1P29-201ENST00000505659 PDZK1P1A8MUH7 402 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 RAD51CO43502 376 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 CHMP2AO43633 222 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 OR7C2O60412 319 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 FLOT1O75955 427 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 PTMAP06454 111 aaKnown RBP1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 SERPINE2P07093 398 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 FOXN2P32314 431 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 LRRC23Q53EV4 343 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 C1orf185Q5T7R7 199 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 RNASEKQ6P5S7 137 aaKnown RBP1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 Q6ZS52 159 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 USP50Q70EL3 339 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 ERO1BQ86YB8 467 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 CBR4Q8N4T8 237 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 TEX9Q8N6V9 391 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 LINC00469Q8N7U9 141 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 ECHDC3Q96DC8 303 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 SLIRPQ9GZT3 109 aaKnown RBP1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 RACGAP1Q9H0H5 632 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 HYPKQ9NX55 129 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 TAS2R1Q9NYW7 299 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 PDP1Q9P0J1 537 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 LRRC42Q9Y546 428 aa1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 BAZ2AQ9UIF9 1905 aaKnown RBP1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 COL11A1P12107 1806 aaPredicted RBP1.1□□□□□ -2.23
HMGB1P29-201ENST00000505659 BAHCC1Q9P281 2608 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms