RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 SSBP3Q9BWW4 388 aaPredicted RBP13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 NSRP1Q9H0G5 558 aaKnown RBP13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 FN3KQ9H479 309 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 B9D1Q9UPM9 204 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 LRCH1Q9Y2L9 728 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 INSIG2Q9Y5U4 225 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 IGHV3OR16-10A0A075B7F0 116 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 IGLV1-36A0A0B4J1U3 117 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 F5H0A9 414 aaPredicted RBP13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 F5H5K5 113 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 F5H5P2 479 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 IRF2P14316 349 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 HIST1H1CP16403 213 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 SELEP16581 610 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 FPR3P25089 353 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 IFNGR2P38484 337 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 RAG2P55895 527 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 GNB2P62879 340 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 MALLQ13021 153 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 RFX4Q33E94 735 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 SLC36A3Q495N2 470 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 BTNL3Q6UXE8 466 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 C1orf87Q8N0U7 546 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 SDR9C7Q8NEX9 313 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 PYURFQ96I23 114 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 TMEM100Q9NV29 134 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 MAGEL2Q9UJ55 1249 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 TMCC3Q9ULS5 477 aa13.4□□□□□ -0.26
PDLIM7-213ENST00000505074 A8MXK9 166 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 MLNRO43193 412 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 LCATP04180 440 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 HLA-DPB1P04440 258 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 FABP3P05413 133 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 PRDX6P30041 224 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 COX10Q12887 443 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 CFAP77Q6ZQR2 320 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 OR6V1Q8N148 313 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 PLEKHA8Q96JA3 519 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 DHRS1Q96LJ7 313 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 NSMCE2Q96MF7 247 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 ATF6BQ99941 703 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 MYLK2Q9H1R3 596 aa13.39□□□□□ -0.27
PDLIM7-213ENST00000505074 FAM181BA6NEQ2 426 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 IQCF6A8MYZ5 107 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 RRM2P31350 389 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 MSX2P35548 267 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 RAD23AP54725 363 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 HIST1H3AP68431 136 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 MXRA7P84157 204 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 TRAP1Q12931 704 aaKnown RBP13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 SLC35F1Q5T1Q4 408 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 HIST2H3PS2Q5TEC6 136 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 ASPHD2Q6ICH7 369 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 SLC18B1Q6NT16 456 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 C9orf139Q6ZV77 190 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 HIST2H3AQ71DI3 136 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 NLRC3Q7RTR2 1065 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 KLBQ86Z14 1044 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 SLC26A10Q8NG04 563 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 OR8B3Q8NGG8 313 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 OR52E2Q8NGJ4 325 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 SPRYD4Q8WW59 207 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 NEIL1Q96FI4 390 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 OR8B2Q96RD0 313 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 SLC30A2Q9BRI3 323 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 GORASP2Q9H8Y8 452 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 MIOXQ9UGB7 285 aa13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 POLR3KQ9Y2Y1 108 aaPredicted RBP13.38□□□□□ -0.27
PDLIM7-213ENST00000505074 CLPSL1A2RUU4 121 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 SLC22A31A6NKX4 558 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 ARPC3O15145 178 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 PIN1P1O15428 100 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 HOXA3O43365 443 aaPredicted RBP13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 WNT2P09544 360 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 ACSM4P0C7M7 580 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 ZNF823P16415 610 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 TPTEP56180 551 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 ECH1Q13011 328 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 TAF9Q16594 264 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 CLEC12AQ5QGZ9 265 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 FAM201AQ5SY85 155 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 PGAP1Q75T13 922 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 MRPL21Q7Z2W9 205 aaKnown RBP13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 CPLX4Q7Z7G2 160 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 PARP8Q8N3A8 854 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 OR52L1Q8NGH7 329 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 OR11L1Q8NGX0 322 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 GNPDA2Q8TDQ7 276 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 SLCO4A1Q96BD0 722 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 TMEM246Q9BRR3 403 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 FUZQ9BT04 418 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 TMEM165Q9HC07 324 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 UFSP2Q9NUQ7 469 aa13.37□□□□□ -0.27
PDLIM7-213ENST00000505074 TRAV40A0A0B4J280 105 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 ARPC2O15144 300 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 NDUFA7O95182 113 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 CD80P33681 288 aa13.36□□□□□ -0.27
PDLIM7-213ENST00000505074 PITPNBP48739 271 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms