RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 MEGF9Q9H1U4 602 aa4.93□□□□□ -1.62
GYPB-204ENST00000504951 KAT8Q9H7Z6 458 aaKnown RBP4.93□□□□□ -1.62
GYPB-204ENST00000504951 INIPQ9NRY2 104 aa4.93□□□□□ -1.62
GYPB-204ENST00000504951 TNFRSF19Q9NS68 423 aa4.93□□□□□ -1.62
GYPB-204ENST00000504951 NKIRAS1Q9NYS0 192 aa4.93□□□□□ -1.62
GYPB-204ENST00000504951 SACSQ9NZJ4 4579 aa4.93□□□□□ -1.62
GYPB-204ENST00000504951 KAAG1Q9UBP8 84 aa4.93□□□□□ -1.62
GYPB-204ENST00000504951 NDRG4Q9ULP0 352 aaKnown RBP4.93□□□□□ -1.62
GYPB-204ENST00000504951 SH3GLB1Q9Y371 365 aa4.93□□□□□ -1.62
GYPB-204ENST00000504951 FAM96BQ9Y3D0 163 aa4.93□□□□□ -1.62
GYPB-204ENST00000504951 MAB21L2Q9Y586 359 aa4.93□□□□□ -1.62
GYPB-204ENST00000504951 TIMM10BQ9Y5J6 103 aa4.93□□□□□ -1.62
GYPB-204ENST00000504951 A0A1B0GVI7 797 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 A0A1W2PRG6 482 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 MCIDASD6RGH6 385 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 E9PQ18 207 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 FBP2O00757 339 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 OR7A10O76100 309 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 LHBP01229 141 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 HIST1H2ABP04908 130 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 OR1E2P47887 323 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 CD47Q08722 323 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 ACSM1Q08AH1 577 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 TOP3AQ13472 1001 aaPredicted RBP4.92□□□□□ -1.62
GYPB-204ENST00000504951 FHL1Q13642 323 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 ENDOGQ14249 297 aaKnown RBP4.92□□□□□ -1.62
GYPB-204ENST00000504951 VMACQ2NL98 169 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 CDONQ4KMG0 1287 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 RABL3Q5HYI8 236 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 FBXW12Q6X9E4 464 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 FOXL2NBQ6ZUU3 175 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 HIST3H2AQ7L7L0 130 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 CROCCP2Q86T23 111 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 MICU2Q8IYU8 434 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 DPP10Q8N608 796 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 LRRC75AQ8NAA5 344 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 PCYOX1LQ8NBM8 494 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 BEND2Q8NDZ0 799 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 OR8G5Q8NG78 346 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 OR10A6Q8NH74 314 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 LIPHQ8WWY8 451 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 SLC7A6Q92536 515 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 HIST1H2ACQ93077 130 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 SGTBQ96EQ0 304 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 RCC1LQ96I51 464 aaKnown RBP4.92□□□□□ -1.62
GYPB-204ENST00000504951 CGREF1Q99674 301 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 PCGF1Q9BSM1 259 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 GPR61Q9BZJ8 451 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 FAM234AQ9H0X4 552 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 MMP28Q9H239 520 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 CNTD2Q9H8S5 307 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 EMC7Q9NPA0 242 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 CCNB1IP1Q9NPC3 277 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 ERVK-18Q9QC07 812 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 ZMAT5Q9UDW3 170 aaKnown RBP4.92□□□□□ -1.62
GYPB-204ENST00000504951 RIMS3Q9UJD0 308 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 CORO2BQ9UQ03 480 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 NDUFAF1Q9Y375 327 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 U3KQK5 164 aa4.92□□□□□ -1.62
GYPB-204ENST00000504951 STAB2Q8WWQ8 2551 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 IGHV3-64DA0A0J9YX35 117 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 LCE6AA0A183 80 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 WI2-2373I1.2A0A1W2PRP0 233 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 DBX1A6NMT0 343 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 H7C1C5 153 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 FXYD1O00168 92 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 IMPA2O14732 288 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 ZNF205O95201 554 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 ZNF26P17031 533 aaPredicted RBP4.91□□□□□ -1.62
GYPB-204ENST00000504951 PMELP40967 661 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 DAP3P51398 398 aaKnown RBP4.91□□□□□ -1.62
GYPB-204ENST00000504951 RAD23AP54725 363 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 TAS2R41P59536 307 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 LCN6P62502 163 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 HOXA4Q00056 320 aaPredicted RBP4.91□□□□□ -1.62
GYPB-204ENST00000504951 GUCY1A3Q02108 690 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 DBPQ10586 325 aaPredicted RBP4.91□□□□□ -1.62
GYPB-204ENST00000504951 NFYCQ13952 458 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 TAF11Q15544 211 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 ALG10Q5BKT4 473 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 DEFB121Q5J5C9 76 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 BEND6Q5SZJ8 279 aaPredicted RBP4.91□□□□□ -1.62
GYPB-204ENST00000504951 CASC10Q5T4H9 136 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 NANOGP8Q6NSW7 305 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 PGBD2Q6P3X8 592 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 CCDC80Q76M96 950 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 PATL1Q86TB9 770 aaKnown RBP4.91□□□□□ -1.62
GYPB-204ENST00000504951 KLHDC1Q8N7A1 406 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 OR4C13Q8NGP0 309 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 OR2T6Q8NHC8 308 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 PPP1R35Q8TAP8 253 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 ZNF420Q8TAQ5 688 aaPredicted RBP4.91□□□□□ -1.62
GYPB-204ENST00000504951 LRRC8CQ8TDW0 803 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 TMEM239Q8WW34 195 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 LHX4Q969G2 390 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 CMBLQ96DG6 245 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 AJUBAQ96IF1 538 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 ZNF583Q96ND8 569 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 WNT10AQ9GZT5 417 aa4.91□□□□□ -1.62
GYPB-204ENST00000504951 TXNIPQ9H3M7 391 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms