RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 OR9Q1Q8NGQ5 310 aa11□□□□□ -0.65
DDX41-204ENST00000504807 GNPDA2Q8TDQ7 276 aa11□□□□□ -0.65
DDX41-204ENST00000504807 APOBEC3DQ96AK3 386 aaPredicted RBP11□□□□□ -0.65
DDX41-204ENST00000504807 DACT3Q96B18 629 aaPredicted RBP11□□□□□ -0.65
DDX41-204ENST00000504807 ZNF48Q96MX3 618 aaPredicted RBP11□□□□□ -0.65
DDX41-204ENST00000504807 PPP1R3CQ9UQK1 317 aa11□□□□□ -0.65
DDX41-204ENST00000504807 A8MXK9 166 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 F5H5K5 113 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 J3QLI3 93 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 FCN3O75636 299 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 RENP00797 406 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 GYPBP06028 91 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 WNT2P09544 360 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 ANPEPP15144 967 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 TUBG1P23258 451 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 MPPED2Q15777 294 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 TMEM155Q4W5P6 130 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 PRAMEF6Q5VXH4 476 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 LYPD2Q6UXB3 125 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 USP43Q70EL4 1123 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 MOGAT3Q86VF5 341 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 SLC37A3Q8NCC5 494 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 JMJD8Q96S16 334 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 ATF6BQ99941 703 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 HCAR1Q9BXC0 346 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 NDEL1Q9GZM8 345 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 NSRP1Q9H0G5 558 aaKnown RBP10.99□□□□□ -0.65
DDX41-204ENST00000504807 TMEM165Q9HC07 324 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 TUBG2Q9NRH3 451 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 ZNF69Q9UC07 566 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 POLR3KQ9Y2Y1 108 aaPredicted RBP10.99□□□□□ -0.65
DDX41-204ENST00000504807 INSIG2Q9Y5U4 225 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 CDH10Q9Y6N8 788 aa10.99□□□□□ -0.65
DDX41-204ENST00000504807 IGHV3OR16-10A0A075B7F0 116 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 J3QW42 95 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 SOX14O95416 240 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 ZNF12P17014 697 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 CD80P33681 288 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 RGS6P49758 472 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 RAD23AP54725 363 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 SMIM11AP58511 58 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 SLC3A1Q07837 685 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 FOXL1Q12952 345 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 ZNF154Q13106 437 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 FBLN7Q53RD9 439 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 DNM1P34Q6PK57 102 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 OR2AE1Q8NHA4 323 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 SLCO4A1Q96BD0 722 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 CLPTM1LQ96KA5 538 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 DUX5Q96PT3 197 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 PITX2Q99697 317 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 TMEM246Q9BRR3 403 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 NMNAT2Q9BZQ4 307 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 PPP1R3EQ9H7J1 279 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 KRCC1Q9NPI7 259 aaPredicted RBP10.98□□□□□ -0.65
DDX41-204ENST00000504807 ARMC1Q9NVT9 282 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 IL20Q9NYY1 176 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 ACTR3BQ9P1U1 418 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 COMMD3-BMI1R4GMX3 469 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 U3KQV3 271 aa10.98□□□□□ -0.65
DDX41-204ENST00000504807 C3orf80F5H4A9 247 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 TNFRSF11BO00300 401 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 GMNNO75496 209 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 SLC2A1P11166 492 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 TNFRSF1AP19438 455 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 TNFSF4P23510 183 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 OTX1P32242 354 aaPredicted RBP10.97□□□□□ -0.65
DDX41-204ENST00000504807 MDH2P40926 338 aaKnown RBP10.97□□□□□ -0.65
DDX41-204ENST00000504807 ZNF92Q03936 586 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 CRMP1Q14194 572 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 GLYATL3Q5SZD4 288 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 C16orf89Q6UX73 402 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 TMEM179BQ7Z7N9 219 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 SIGLECL1Q8N7X8 197 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 ZNF511Q8NB15 262 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 AQP11Q8NBQ7 271 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 NANPQ8TBE9 248 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 ST7LQ8TDW4 575 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 MCUR1Q96AQ8 359 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 ZNF582Q96NG8 517 aaPredicted RBP10.97□□□□□ -0.65
DDX41-204ENST00000504807 AMELYQ99218 206 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 NIPSNAP1Q9BPW8 284 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 TRIM15Q9C019 465 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 MED20Q9H944 212 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 UNKLQ9H9P5 680 aaKnown RBP10.97□□□□□ -0.65
DDX41-204ENST00000504807 TMCC3Q9ULS5 477 aa10.97□□□□□ -0.65
DDX41-204ENST00000504807 PPIAL4EA0A075B759 164 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 PPIAL4CA0A0B4J2A2 164 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 B2RBV5 119 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 PPIAL4DF5H284 164 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 IDH3BO43837 385 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 FOXH1O75593 365 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 HLA-DQA2P01906 255 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 LCATP04180 440 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 PPIAL4FP0DN26 164 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 IGHV4-38-2P0DP08 117 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 UBA52P62987 128 aaKnown RBP10.96□□□□□ -0.65
DDX41-204ENST00000504807 ELF3P78545 371 aaPredicted RBP10.96□□□□□ -0.65
DDX41-204ENST00000504807 MXRA7P84157 204 aa10.96□□□□□ -0.65
DDX41-204ENST00000504807 ZNF404Q494X3 552 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms