RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PRKXP51817 358 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 SELENOVP59797 346 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 CXCR4P61073 352 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 ERVS71-1P61550 626 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF91Q05481 1191 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 CDK5R2Q13319 367 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF718Q3SXZ3 478 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 C6orf52Q5T4I8 152 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 MBNL2Q5VZF2 373 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 IZUMO2Q6UXV1 221 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 SPATC1Q76KD6 591 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 KRT77Q7Z794 578 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 NAA40Q86UY6 237 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF679Q8IYX0 411 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 SYNPRQ8TBG9 265 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 SLC25A40Q8TBP6 338 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 FBLIM1Q8WUP2 373 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 OR8B4Q96RC9 309 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 MRPL37Q9BZE1 423 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 OR2J1Q9GZK6 312 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 PLK3Q9H4B4 646 aa10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 BEX4Q9NWD9 120 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 RPL36Q9Y3U8 105 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-208ENST00000504489 A0A1W2PQL4 384 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 PRR32B1ATL7 298 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 APOL3O95236 402 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 IGHV3-13P01766 116 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 LCATP04180 440 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 PAX1P15863 534 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 HSD11B1P28845 292 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 GCH1P30793 250 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 SLC6A9P48067 706 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 CX3CR1P49238 355 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 KLF3P57682 345 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 ACTC1P68032 377 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 ACTA1P68133 377 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 EGR3Q06889 387 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 RAB40BQ12829 278 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 SMN1Q16637 294 aaKnown RBP10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 KLHL22Q53GT1 634 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF322Q6U7Q0 402 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 LRRN1Q6UXK5 716 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 THAP5Q7Z6K1 395 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 LRP11Q86VZ4 500 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF283Q8N7M2 679 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 CNIH3Q8TBE1 160 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 KLF14Q8TD94 323 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 LGALS12Q96DT0 336 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 MROQ9BYG7 248 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 RASSF4Q9H2L5 321 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 POFUT1Q9H488 388 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 CXorf56Q9H5V9 222 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 SP140LQ9H930 580 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 AMBNQ9NP70 447 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 ZNF701Q9NV72 531 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 PGPEP1Q9NXJ5 209 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 SLCO1C1Q9NYB5 712 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 DUSP13Q9UII6 198 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 LRP12Q9Y561 859 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 PMF1-BGLAPU3KQ54 211 aa10.21□□□□□ -0.77
PDLIM5-208ENST00000504489 H7C417 338 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 WIPF1O43516 503 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 FADS2O95864 444 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 CLPTM1O96005 669 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 RAC2P15153 192 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 MPV17P39210 176 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 RIDAP52758 137 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 ZNF121P58317 390 aaPredicted RBP10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 SNRPD2P62316 118 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 MOGQ16653 247 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 DEFB113Q30KQ7 82 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 SPATA46Q5T0L3 261 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 FBXW12Q6X9E4 464 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 PRSS45Q7RTY3 260 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 LINC00528Q8N1L1 170 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 RFLNBQ8N5W9 214 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 ACBD7Q8N6N7 88 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 OR10H4Q8NGA5 316 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 HAVCR1Q96D42 359 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 TBX5Q99593 518 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 SYT3Q9BQG1 590 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 ANKRD60Q9BZ19 345 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 FGF20Q9NP95 211 aaPredicted RBP10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 PLCXD1Q9NUJ7 323 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 GPR160Q9UJ42 338 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 FZR1Q9UM11 496 aa10.2□□□□□ -0.78
PDLIM5-208ENST00000504489 CREBBPQ92793 2442 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 DOCK11Q5JSL3 2073 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 DAPL1A0PJW8 107 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 IRGMA1A4Y4 181 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 ACOD1A6NK06 481 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 PSMD9O00233 223 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 SULT1C4O75897 302 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 IGHA1P01876 353 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 KITLGP21583 273 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 MYF6P23409 242 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 PPOXP50336 477 aa10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 PSMA6P60900 246 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-208ENST00000504489 ZNF85Q03923 595 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms