RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 ACBD7Q8N6N7 88 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 ZNF283Q8N7M2 679 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 BPIFB6Q8NFQ5 453 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 OR52I1Q8NGK6 324 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 LILRB1Q8NHL6 650 aaPredicted RBP8.64□□□□□ -1.03
NUP54-203ENST00000504173 ABHD4Q8TB40 342 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 FBXW5Q969U6 566 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 OR8B4Q96RC9 309 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 MROQ9BYG7 248 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 BCL2L14Q9BZR8 327 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 CA10Q9NS85 328 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 MRPS18AQ9NVS2 196 aaKnown RBP8.64□□□□□ -1.03
NUP54-203ENST00000504173 SLCO1C1Q9NYB5 712 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 CISD1Q9NZ45 108 aaKnown RBP8.64□□□□□ -1.03
NUP54-203ENST00000504173 MYRFQ9Y2G1 1151 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 LRP12Q9Y561 859 aa8.64□□□□□ -1.03
NUP54-203ENST00000504173 EFCAB10A6NFE3 127 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 VSTM5A8MXK1 200 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 PRR32B1ATL7 298 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 J3QRE1 110 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 SLC1A7O00341 560 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 DENRO43583 198 aaKnown RBP8.63□□□□□ -1.03
NUP54-203ENST00000504173 XPNPEP2O43895 674 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 GPRIN2O60269 458 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 ZNF254O75437 659 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 ATE1O95260 518 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 RAF1P04049 648 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 LCATP04180 440 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 KRT8P05787 483 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 ANXA2P07355 339 aaKnown RBP8.63□□□□□ -1.03
NUP54-203ENST00000504173 OTX1P32242 354 aaPredicted RBP8.63□□□□□ -1.03
NUP54-203ENST00000504173 THBS4P35443 961 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 GLRXP35754 106 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 RGS6P49758 472 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 FABP6P51161 128 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 RIDAP52758 137 aaKnown RBP8.63□□□□□ -1.03
NUP54-203ENST00000504173 PPP1CBP62140 327 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 CSNK2BP67870 215 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 NKX6-1P78426 367 aaPredicted RBP8.63□□□□□ -1.03
NUP54-203ENST00000504173 ROM1Q03395 351 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 ZNF85Q03923 595 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 EGR3Q06889 387 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 RSPO1Q2MKA7 263 aaPredicted RBP8.63□□□□□ -1.03
NUP54-203ENST00000504173 RGS7BPQ6MZT1 257 aaPredicted RBP8.63□□□□□ -1.03
NUP54-203ENST00000504173 ZNF544Q6NX49 715 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 DEGS2Q6QHC5 323 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 DRAM2Q6UX65 266 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 AHSA2Q719I0 299 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 SSX6Q7RTT6 188 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 FAM220AQ7Z4H9 259 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 ZNF679Q8IYX0 411 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 ZNF101Q8IZC7 436 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 FBXL14Q8N1E6 418 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 ZNF540Q8NDQ6 660 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 OR1J1Q8NGS3 322 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 SNX33Q8WV41 574 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 GGHQ92820 318 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 MRPL48Q96GC5 212 aaKnown RBP8.63□□□□□ -1.03
NUP54-203ENST00000504173 MYCBPQ99417 103 aaPredicted RBP8.63□□□□□ -1.03
NUP54-203ENST00000504173 DOK1Q99704 481 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 DHRS9Q9BPW9 319 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 RHNO1Q9BSD3 238 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 ZNF442Q9H7R0 627 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 NIPAL2Q9H841 368 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 PLEKHF2Q9H8W4 249 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 FGF20Q9NP95 211 aaPredicted RBP8.63□□□□□ -1.03
NUP54-203ENST00000504173 INPP5EQ9NRR6 644 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 PLCXD1Q9NUJ7 323 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 TBCCD1Q9NVR7 557 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 SCN3BQ9NY72 215 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 CNOT2Q9NZN8 540 aaKnown RBP8.63□□□□□ -1.03
NUP54-203ENST00000504173 PSORS1C1Q9UIG5 152 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 N6AMT1Q9Y5N5 214 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 ROS1P08922 2347 aa8.63□□□□□ -1.03
NUP54-203ENST00000504173 J3QW42 95 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 MAGEB4O15481 346 aaPredicted RBP8.62□□□□□ -1.03
NUP54-203ENST00000504173 KCNAB3O43448 404 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 ICMTO60725 284 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 NGFP01138 241 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 IGHA1P01876 353 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 SLC2A1P11166 492 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 PIPP12273 146 aaPredicted RBP8.62□□□□□ -1.03
NUP54-203ENST00000504173 MYL12AP19105 171 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 DCKP27707 260 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 APOBEC3AP31941 199 aaPredicted RBP8.62□□□□□ -1.03
NUP54-203ENST00000504173 ZNF121P58317 390 aaPredicted RBP8.62□□□□□ -1.03
NUP54-203ENST00000504173 PSMA6P60900 246 aaKnown RBP8.62□□□□□ -1.03
NUP54-203ENST00000504173 ERVS71-1P61550 626 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 ACTA2P62736 377 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 ACTG2P63267 376 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 MED21Q13503 144 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 ZNF829Q3KNS6 432 aaPredicted RBP8.62□□□□□ -1.03
NUP54-203ENST00000504173 SPATA46Q5T0L3 261 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 PLEKHG7Q6ZR37 379 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 LHFPL3Q86UP9 236 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 NAA40Q86UY6 237 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 C1orf174Q8IYL3 243 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 ZNF786Q8N393 782 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 STX19Q8N4C7 294 aa8.62□□□□□ -1.03
NUP54-203ENST00000504173 YIPF7Q8N8F6 280 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms