RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CST11Q9H112 138 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 NELFAQ9H3P2 528 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PDE7BQ9NP56 450 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 B3GAT2Q9NPZ5 323 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZCCHC3Q9NUD5 404 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MYOTQ9UBF9 498 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SHANK1Q9Y566 2161 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 A0A0A6YYD5 115 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 NPEPPSL1A6NEC2 478 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 B4E171 279 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LGALS8O00214 317 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 FARS2O95363 451 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OR8G3PP0DMU2 310 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LAMP1P11279 417 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 NR2C1P13056 603 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LAMP2P13473 410 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TACR1P25103 407 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ACKR3P25106 362 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MC4RP32245 332 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SLC11A2P49281 568 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF41P51814 821 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 UBE2G2P60604 165 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 LCN6P62502 163 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 AWAT1Q58HT5 328 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ACER2Q5QJU3 275 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PHF19Q5T6S3 580 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OR52W1Q6IF63 320 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM71Q6P5X7 295 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ULK3Q6PHR2 472 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 CEACAM20Q6UY09 585 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 GKN2Q86XP6 184 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TGIF2LXQ8IUE1 241 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF584Q8IVC4 421 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 PNKDQ8N490 385 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MORN4Q8NDC4 146 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM104Q8NE00 496 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OR10G4Q8NGN3 311 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SFXN5Q8TD22 340 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 NEK7Q8TDX7 302 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 C2CD4CQ8TF44 421 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TNFRSF14Q92956 283 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 DTD2Q96FN9 168 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ADAD1Q96M93 576 aaKnown RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 OR5B12Q96R08 314 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TXNDC17Q9BRA2 123 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZPBPQ9BS86 351 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 TMEM208Q9BTX3 173 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF350Q9GZX5 532 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 SRD5A3Q9H8P0 318 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 FN3KRPQ9HA64 309 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 WFDC1Q9HC57 220 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 C19orf53Q9UNZ5 99 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-204ENST00000503468 GPR52Q9Y2T5 361 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 MYO18BQ8IUG5 2567 aa2.5□□□□□ -2.01
NEDD4-204ENST00000503468 DOCK10Q96BY6 2186 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PLCE1Q9P212 2302 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 A8MTW9 85 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 TP53I11O14683 189 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 ACTL6AO96019 429 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SNRNP70P08621 437 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 OR8U9P0C7N5 309 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 COX5BP10606 129 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PTHLHP12272 177 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 IMPA1P29218 277 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 RBMXP38159 391 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 P2RY2P41231 377 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 CDKN1BP46527 198 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PDX1P52945 283 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 IL13RA1P78552 427 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 LCN2P80188 198 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 GAMTQ14353 236 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 OR8G1Q15617 311 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 RPE65Q16518 533 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 ZNF791Q3KP31 576 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 KHDC3LQ587J8 217 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 ALG10BQ5I7T1 473 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SIRPB2Q5JXA9 342 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PRAMEF18Q5VWM3 479 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 DEGS2Q6QHC5 323 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SLC25A26Q70HW3 274 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 TMED4Q7Z7H5 227 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 LYG2Q86SG7 212 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 RAB42Q8N4Z0 105 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SUMF2Q8NBJ7 301 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SLC38A9Q8NBW4 561 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 OR4B1Q8NGF8 309 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 OR52E1Q8NGJ3 308 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 OR8U1Q8NH10 309 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 PCNPQ8WW12 178 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 GHSRQ92847 366 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 GALNT14Q96FL9 552 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 SLC46A2Q9BY10 475 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 NMES1Q9C002 83 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 TCEAL2Q9H3H9 227 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 LTB4R2Q9NPC1 389 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 MRPL17Q9NRX2 175 aaKnown RBP2.49□□□□□ -2.01
NEDD4-204ENST00000503468 CDC42EP3Q9UKI2 254 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 MOKQ9UQ07 419 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 COL6A6A6NMZ7 2263 aa2.49□□□□□ -2.01
NEDD4-204ENST00000503468 LRRC14BA6NHZ5 514 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms