RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 ICAM2P13598 275 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 TBPP20226 339 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 SFTPDP35247 375 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 EIF1AXP47813 144 aaKnown RBP10.63□□□□□ -0.71
NUP54-202ENST00000502850 ZNF81P51508 661 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 CLDN6P56747 220 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 TSPAN5P62079 268 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 FAAP20Q6NZ36 180 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 ZNF529Q6P280 563 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 DOK3Q7L591 496 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 SLC36A1Q7Z2H8 476 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 ZNF584Q8IVC4 421 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 ARMC10Q8N2F6 343 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 FTMTQ8N4E7 242 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 OR11H4Q8NGC9 324 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 OR51A2Q8NGJ7 313 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 PAQR8Q8TEZ7 354 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 RELTQ969Z4 430 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 FGGYQ96C11 551 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 INTS12Q96CB8 462 aaKnown RBP10.63□□□□□ -0.71
NUP54-202ENST00000502850 SGCZQ96LD1 299 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 TMEM185BQ9H7F4 350 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 FSCN3Q9NQT6 498 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 HRH3Q9Y5N1 445 aa10.63□□□□□ -0.71
NUP54-202ENST00000502850 ZNF736B4DX44 427 aaPredicted RBP10.62□□□□□ -0.71
NUP54-202ENST00000502850 M0R233 179 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 CD74P04233 296 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 CD3DP04234 171 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 CHRM2P08172 466 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 UBBP0CG47 229 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 LIFP15018 202 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 CCL1P22362 96 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 MPZP25189 248 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 MPLP40238 635 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 CSNK1A1P48729 337 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 SELENOPP49908 381 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 ZNF133P52736 654 aaPredicted RBP10.62□□□□□ -0.71
NUP54-202ENST00000502850 GUCA2AQ02747 115 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 C19orf57Q0VDD7 668 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 PLA2G2CQ5R387 149 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 C10orf128Q5T292 105 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 PRAMEF20Q5VT98 475 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 THOC7Q6I9Y2 204 aaKnown RBP10.62□□□□□ -0.71
NUP54-202ENST00000502850 SLC23A3Q6PIS1 610 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 CFAP77Q6ZQR2 320 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 TMEM156Q8N614 296 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 UXS1Q8NBZ7 420 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 ZNF680Q8NEM1 530 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 OR51S1Q8NGJ8 323 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 TNFAIP8L1Q8WVP5 186 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 TMEM41AQ96HV5 264 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 PRRT1Q99946 306 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 HPF1Q9NWY4 346 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 SLC2A8Q9NY64 477 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 HS3ST3B1Q9Y662 390 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 CACNA1CQ13936 2221 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 NPIPA2E9PIF3 369 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 NPIPA3F8WFD2 350 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 CBR3O75828 277 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 KLF7O75840 302 aaPredicted RBP10.62□□□□□ -0.71
NUP54-202ENST00000502850 SLC22A5O76082 557 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 ITGB2P05107 769 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 QDPRP09417 244 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 ZNF28P17035 718 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 MSR1P21757 451 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 CTSSP25774 331 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 GMFBP60983 142 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 RAB14P61106 215 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 TRIM61Q5EBN2 209 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 RAET1LQ5VY80 246 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 RPS19BP1Q86WX3 136 aaKnown RBP10.62□□□□□ -0.71
NUP54-202ENST00000502850 COMMD2Q86X83 199 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 WDFY1Q8IWB7 410 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 OR10S1Q8NGN2 331 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 OR1J2Q8NGS2 313 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 AQP3Q92482 292 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 MS4A3Q96HJ5 214 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 PIGQQ9BRB3 760 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 B3GNT4Q9C0J1 378 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 CNTD2Q9H8S5 307 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 SH2D2AQ9NP31 389 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 SLC39A1Q9NY26 324 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 GLTPQ9NZD2 209 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 ASH2LQ9UBL3 628 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 UBQLN2Q9UHD9 624 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 PLEKHA6Q9Y2H5 1048 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 RHBDD3Q9Y3P4 386 aa10.62□□□□□ -0.71
NUP54-202ENST00000502850 TMEM82A0PJX8 343 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 OR2M5A3KFT3 312 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 F5H5P2 479 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 ERVH48-1M5A8F1 160 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 AMY2AP04746 511 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 ZNF93P35789 620 aaPredicted RBP10.61□□□□□ -0.71
NUP54-202ENST00000502850 CX3CR1P49238 355 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 CLDN17P56750 224 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 MLF1P58340 268 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 H3F3AP84243 136 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 LGALSLQ3ZCW2 172 aaPredicted RBP10.61□□□□□ -0.71
NUP54-202ENST00000502850 C4orf46Q504U0 113 aa10.61□□□□□ -0.71
NUP54-202ENST00000502850 CARD17Q5XLA6 110 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms