RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 A0A1W2PRM7 423 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 OOEPA6NGQ2 149 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 NPFFO15130 113 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 NDUFA2O43678 99 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 PTBP3O95758 552 aaKnown RBP12.78□□□□□ -0.36
HDAC6-236ENST00000498808 ECDO95905 644 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-236ENST00000498808 IFI30P13284 250 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 KLRD1Q13241 179 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 C11orf91Q3C1V1 193 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 NSUN5P1Q3KNT7 163 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 MESTQ5EB52 335 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 COLCA1Q6ZS62 124 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 CALHM3Q86XJ0 350 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 FAM90A1Q86YD7 464 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 SPERTQ8NA61 448 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 OR4S1Q8NGB4 309 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 OR51A7Q8NH64 312 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 ST8SIA4Q92187 359 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 BPIFA2Q96DR5 249 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 WWC2-AS2Q96NR7 200 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 HCAR1Q9BXC0 346 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 FN3KRPQ9HA64 309 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 ONECUT1Q9UBC0 465 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 TRAV38-1A0A0B4J264 116 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 A0A1B0GW55 424 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 DUX4L2P0CJ85 424 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 DUX4L3P0CJ86 424 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 DUX4L4P0CJ87 422 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 DUX4L5P0CJ88 424 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 DUX4L6P0CJ89 424 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 DUX4L7P0CJ90 424 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 LSM6P62312 80 aaKnown RBP12.77□□□□□ -0.37
HDAC6-236ENST00000498808 GK2Q14410 553 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-236ENST00000498808 RSPO1Q2MKA7 263 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-236ENST00000498808 DUX4L9Q6RFH8 374 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-236ENST00000498808 PNKDQ8N490 385 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 LY6G5BQ8NDX9 201 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 ZNF583Q96ND8 569 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 POLR2J2Q9GZM3 115 aaKnown RBP12.77□□□□□ -0.37
HDAC6-236ENST00000498808 POLR2J3Q9H1A7 115 aaKnown RBP12.77□□□□□ -0.37
HDAC6-236ENST00000498808 CENPHQ9H3R5 247 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 KAT8Q9H7Z6 458 aaKnown RBP12.77□□□□□ -0.37
HDAC6-236ENST00000498808 DNAJB11Q9UBS4 358 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 DUX4Q9UBX2 424 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 ADAM18Q9Y3Q7 739 aa12.77□□□□□ -0.37
HDAC6-236ENST00000498808 H3BUX3 64 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 PAHP00439 452 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 VSIG10L2P0DP72 767 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 EEF1B2P24534 225 aaKnown RBP12.76□□□□□ -0.37
HDAC6-236ENST00000498808 SAA4P35542 130 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 GUCA2AQ02747 115 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 POU4F2Q12837 409 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 AGKQ53H12 422 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 CCDC80Q76M96 950 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 DHDDSQ86SQ9 333 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 GCSAMQ8N6F7 178 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 Q8N7P7 452 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 OR4C13Q8NGP0 309 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 OR2T6Q8NHC8 308 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 RASSF5Q8WWW0 418 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 R3HDM4Q96D70 268 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 Q96M85 177 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 CGREF1Q99674 301 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 COQ7Q99807 217 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 TRIM36Q9NQ86 728 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 KAAG1Q9UBP8 84 aa12.76□□□□□ -0.37
HDAC6-236ENST00000498808 COA3Q9Y2R0 106 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-236ENST00000498808 TMEM120BA0PK00 339 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 MEIOCA2RUB1 952 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 PRSS37A4D1T9 235 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 MEGF11A6BM72 1044 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 ADARB2-AS1A8MUL3 147 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 IMPA2O14732 288 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 POLR3GO15318 223 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-236ENST00000498808 CA6P23280 308 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 OR1E2P47887 323 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 HIST1H3AP68431 136 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 ELF3P78545 371 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-236ENST00000498808 OR8G1Q15617 311 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 HIST2H3PS2Q5TEC6 136 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 ZNF826PQ6ZT77 177 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 HIST2H3AQ71DI3 136 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 MREGQ8N565 214 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 OR13C2Q8NGS9 318 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 OR10A6Q8NH74 314 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 TNFRSF14Q92956 283 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 EBF4Q9BQW3 602 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 HDHD2Q9H0R4 259 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 RERGLQ9H628 205 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 RANBP3Q9H6Z4 567 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-236ENST00000498808 C1orf123Q9NWV4 160 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 MAB21L2Q9Y586 359 aa12.75□□□□□ -0.37
HDAC6-236ENST00000498808 IGHV3OR15-7A0A075B7D8 119 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 AHCYL1O43865 530 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 SLC16A7O60669 478 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 FBXO24O75426 580 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 CD28P10747 220 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 IGLL1P15814 213 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 ZNF26P17031 533 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-236ENST00000498808 GZMMP51124 257 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms