RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 HCAR1Q9BXC0 346 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 TMPRSS13Q9BYE2 586 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 OCEL1Q9H607 264 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 CENPMQ9NSP4 180 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 N6AMT1Q9Y5N5 214 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 COMMD3-BMI1R4GMX3 469 aa13.58□□□□□ -0.24
NR1H3-227ENST00000498548 ATRQ13535 2644 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 DHRS12A0PJE2 317 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 FAM183AA6NL82 134 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 M0R135 149 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 ZNF593O00488 134 aaPredicted RBP13.57□□□□□ -0.24
NR1H3-227ENST00000498548 GNGT2O14610 69 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 SURF4O15260 269 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 GYG2O15488 501 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 RGS9O75916 674 aaPredicted RBP13.57□□□□□ -0.24
NR1H3-227ENST00000498548 CYB5R3P00387 301 aaPredicted RBP13.57□□□□□ -0.24
NR1H3-227ENST00000498548 PNPP00491 289 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 SELEP16581 610 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 SPI1P17947 270 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 ZFP36P26651 326 aaKnown RBP13.57□□□□□ -0.24
NR1H3-227ENST00000498548 FMO3P31513 532 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 PRKXP51817 358 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 ECH1Q13011 328 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 GK2Q14410 553 aaPredicted RBP13.57□□□□□ -0.24
NR1H3-227ENST00000498548 SNAI3Q3KNW1 292 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 SHQ1Q6PI26 577 aaKnown RBP13.57□□□□□ -0.24
NR1H3-227ENST00000498548 SPATC1Q76KD6 591 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 SPATA24Q86W54 205 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 HS3ST5Q8IZT8 346 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 SLC7A6OSQ96CW6 309 aaPredicted RBP13.57□□□□□ -0.24
NR1H3-227ENST00000498548 ZNF799Q96GE5 643 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 SLC30A2Q9BRI3 323 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 C19orf24Q9BVV8 132 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 NMNAT2Q9BZQ4 307 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 GCM1Q9NP62 436 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 TMEM100Q9NV29 134 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 PDP1Q9P0J1 537 aaPredicted RBP13.57□□□□□ -0.24
NR1H3-227ENST00000498548 KCNG2Q9UJ96 466 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 PCDHB10Q9UN67 800 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 BAIAP2Q9UQB8 552 aa13.57□□□□□ -0.24
NR1H3-227ENST00000498548 WNK2Q9Y3S1 2297 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 AQP12BA6NM10 295 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 H3BN98 237 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 TMEM178BH3BS89 294 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 ADRA2CP18825 462 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 PRKACGP22612 351 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 POU1F1P28069 291 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 PMELP40967 661 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 SLC6A9P48067 706 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 ENTPD1P49961 510 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 MMP16P51512 607 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 SLC25A1P53007 311 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 SEC61A1P61619 476 aaKnown RBP13.56□□□□□ -0.24
NR1H3-227ENST00000498548 MALLQ13021 153 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 ZMYND11Q15326 602 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 FAM201AQ5SY85 155 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 DCAF12L2Q5VW00 463 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 SLC27A4Q6P1M0 643 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 MOGAT3Q86VF5 341 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 LRRC28Q86X40 367 aaPredicted RBP13.56□□□□□ -0.24
NR1H3-227ENST00000498548 AQP12AQ8IXF9 295 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 OR6K6Q8NGW6 343 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 OR2AE1Q8NHA4 323 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 TEX47Q8TBZ9 253 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 ST7LQ8TDW4 575 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 SPTSSAQ969W0 71 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 SLAMF6Q96DU3 332 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.56□□□□□ -0.24
NR1H3-227ENST00000498548 COL6A5A8TX70 2615 aa13.56□□□□□ -0.24
NR1H3-227ENST00000498548 TCF21O43680 179 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 IFNGP01579 166 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 SLC2A1P11166 492 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 SRP9P49458 86 aaKnown RBP13.55□□□□□ -0.24
NR1H3-227ENST00000498548 BTG1P62324 171 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 ZNF92Q03936 586 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 TAF13Q15543 124 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 LINC01590Q5TEZ4 76 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 LIPNQ5VXI9 398 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 CD300LDQ6UXZ3 194 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 PGAP1Q75T13 922 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 MRPL21Q7Z2W9 205 aaKnown RBP13.55□□□□□ -0.24
NR1H3-227ENST00000498548 RFLNBQ8N5W9 214 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 POP5Q969H6 163 aaKnown RBP13.55□□□□□ -0.24
NR1H3-227ENST00000498548 COPS4Q9BT78 406 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 REPIN1Q9BWE0 567 aaKnown RBP13.55□□□□□ -0.24
NR1H3-227ENST00000498548 PATZ1Q9HBE1 687 aaKnown RBP13.55□□□□□ -0.24
NR1H3-227ENST00000498548 CMC2Q9NRP2 79 aa13.55□□□□□ -0.24
NR1H3-227ENST00000498548 A0A0G2JMP0 313 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 A0A0X1KG70 313 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 RIIAD1A6NNX1 92 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 VENTXO95231 258 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 ZNF3P17036 446 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 GRK5P34947 590 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 HOXA4Q00056 320 aaPredicted RBP13.54□□□□□ -0.24
NR1H3-227ENST00000498548 EIF2B1Q14232 305 aaKnown RBP13.54□□□□□ -0.24
NR1H3-227ENST00000498548 FLOT2Q14254 428 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 GINS1Q14691 196 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 DNAL1Q4LDG9 190 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 GLYATL3Q5SZD4 288 aa13.54□□□□□ -0.24
NR1H3-227ENST00000498548 PRAMEF6Q5VXH4 476 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms