RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TNFRSF10AO00220 468 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 P04436 131 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 SLC2A1P11166 492 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 TCN2P20062 427 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 SRD5A2P31213 254 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 GUCA1AP43080 201 aaPredicted RBP11.53□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF133P52736 654 aaPredicted RBP11.53□□□□□ -0.56
GARNL3-220ENST00000496711 MOGAT2Q3SYC2 334 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 RAB12Q6IQ22 244 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 FOXL2NBQ6ZUU3 175 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 NLRC3Q7RTR2 1065 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF283Q8N7M2 679 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 TMEM229BQ8NBD8 167 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 ZBTB44Q8NCP5 570 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 OR51S1Q8NGJ8 323 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF385AQ96PM9 386 aaKnown RBP11.53□□□□□ -0.56
GARNL3-220ENST00000496711 UCN2Q96RP3 112 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF416Q9BWM5 594 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 ARRDC1-AS1Q9H2J1 176 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 NELFAQ9H3P2 528 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 MYEF2Q9P2K5 600 aaKnown RBP11.53□□□□□ -0.56
GARNL3-220ENST00000496711 RAB22AQ9UL26 194 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 SDK2Q58EX2 2172 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 TNFSF11O14788 317 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 DNPH1O43598 174 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 WDPCPO95876 746 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 CCL1P22362 96 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 Q0VFX4 171 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 SGCAQ16586 387 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 PHYHD1Q5SRE7 291 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 CDH26Q8IXH8 852 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 TMEM123Q8N131 208 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 ACBD4Q8NC06 268 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 OR2T35Q8NGX2 323 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 OR8S1Q8NH09 359 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 DVL3Q92997 716 aaPredicted RBP11.53□□□□□ -0.56
GARNL3-220ENST00000496711 FAM46BQ96A09 425 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 PNPLA2Q96AD5 504 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 B3GNT4Q9C0J1 378 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 GPR84Q9NQS5 396 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 ZNF107Q9UII5 783 aaPredicted RBP11.53□□□□□ -0.56
GARNL3-220ENST00000496711 SLC5A6Q9Y289 635 aa11.53□□□□□ -0.56
GARNL3-220ENST00000496711 DOCK10Q96BY6 2186 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 A0A0G2JMM0 328 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 A0A0J9YW62 118 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 A0A1W2PPB8 328 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 A0A1W2PRS3 328 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 UBE2QL1A1L167 161 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 KIR3DP1A8MWS1 328 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 TSC22D2O75157 780 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 SCGNO76038 276 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 RLN1P04808 185 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 FCER2P06734 321 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 VSIG10L2P0DP72 767 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 GALK2Q01415 458 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 UNC119Q13432 240 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 SSPNQ14714 243 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 FAM57BQ71RH2 274 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 PGAP1Q75T13 922 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 DOK3Q7L591 496 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 RAB11FIP2Q7L804 512 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 SLC36A1Q7Z2H8 476 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 TIPARPQ7Z3E1 657 aaKnown RBP11.52□□□□□ -0.57
GARNL3-220ENST00000496711 SNAPC3Q92966 411 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 NKD1Q969G9 470 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 TAAR9Q96RI9 348 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 DDA1Q9BW61 102 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 SLC23A1Q9UHI7 598 aa11.52□□□□□ -0.57
GARNL3-220ENST00000496711 PMS2P1A4D2B8 440 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 TMEM235A6NFC5 223 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 G3V3Q6 166 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 RAB3DO95716 219 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 CYB5AP00167 134 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 GIPP09681 153 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 VSIG8P0DPA2 414 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 ABOP16442 354 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 CTSSP25774 331 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 ZNF93P35789 620 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 HTR2BP41595 481 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 SUCLG1P53597 346 aaKnown RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 B3GALT5-AS1P59052 145 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 QRFPP83859 136 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 ENDOGQ14249 297 aaKnown RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 CSRP2Q16527 193 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 CCDC157Q569K6 752 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 B3GNTL1Q67FW5 361 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 AWAT2Q6E213 333 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 H3F3CQ6NXT2 135 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 BEST3Q8N1M1 668 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 PAQR4Q8N4S7 273 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 ESX1Q8N693 406 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 GJC3Q8NFK1 279 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 KCNE4Q8WWG9 221 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 AQP3Q92482 292 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 NABP1Q96AH0 204 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 INTS12Q96CB8 462 aaKnown RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 FAM71F1Q96KD3 344 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 NECAB3Q96P71 396 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 SRXN1Q9BYN0 137 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 CA10Q9NS85 328 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms