RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ACOXLQ9NUZ1 547 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 R4GMQ9 66 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 CADP27708 2225 aa18.77■□□□□ 0.6
C9orf3-222ENST00000496567 CTAG2O75638 210 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 NGFP01138 241 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 GLRXP35754 106 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 NKX6-1P78426 367 aaPredicted RBP18.76■□□□□ 0.59
C9orf3-222ENST00000496567 OR52H1Q8NGJ2 320 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 OR1J1Q8NGS3 322 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 C14orf79Q96F83 325 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 MND1Q9BWT6 205 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 MOB1AQ9H8S9 216 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 ISG20L2Q9H9L3 353 aaKnown RBP18.76■□□□□ 0.59
C9orf3-222ENST00000496567 BRD7Q9NPI1 651 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 FAM206AQ9NX38 181 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 VSTM5A8MXK1 200 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 PLAUP00749 431 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 MT-ND2P03891 347 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 LCKP06239 509 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 SLC2A1P11166 492 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 GBX2P52951 348 aaPredicted RBP18.76■□□□□ 0.59
C9orf3-222ENST00000496567 ZNF672Q499Z4 452 aaPredicted RBP18.76■□□□□ 0.59
C9orf3-222ENST00000496567 OR2G6Q5TZ20 316 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 ZNF544Q6NX49 715 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 RFPL4BQ6ZWI9 263 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 NANOGP1Q8N7R0 232 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 SPRYD4Q8WW59 207 aaPredicted RBP18.76■□□□□ 0.59
C9orf3-222ENST00000496567 PELI1Q96FA3 418 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 PGAM5Q96HS1 289 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 STARD10Q9Y365 291 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 N6AMT1Q9Y5N5 214 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 SNX5Q9Y5X3 404 aa18.76■□□□□ 0.59
C9orf3-222ENST00000496567 MAGEA13PA6NCF6 341 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 LOC110117498-PIK3R3F6TDL0 507 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 SRSF10O75494 262 aaKnown RBP18.75■□□□□ 0.59
C9orf3-222ENST00000496567 PPP1CBP62140 327 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 MALLQ13021 153 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 IRF3Q14653 427 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 FAM57BQ71RH2 274 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 PRSS45Q7RTY3 260 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 RORBQ92753 470 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 OR10A2Q9H208 303 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 ZNF442Q9H7R0 627 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 CA10Q9NS85 328 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 CISD1Q9NZ45 108 aaKnown RBP18.75■□□□□ 0.59
C9orf3-222ENST00000496567 GTF2A1LQ9UNN4 478 aa18.75■□□□□ 0.59
C9orf3-222ENST00000496567 PNPP00491 289 aa18.74■□□□□ 0.59
C9orf3-222ENST00000496567 HTR1AP08908 422 aa18.74■□□□□ 0.59
C9orf3-222ENST00000496567 WNT4P56705 351 aa18.74■□□□□ 0.59
C9orf3-222ENST00000496567 TLE4Q04727 773 aa18.74■□□□□ 0.59
C9orf3-222ENST00000496567 RGS7BPQ6MZT1 257 aaPredicted RBP18.74■□□□□ 0.59
C9orf3-222ENST00000496567 ZNF295-AS1Q8N0V1 137 aa18.74■□□□□ 0.59
C9orf3-222ENST00000496567 AKAP1Q92667 903 aaKnown RBP eCLIP18.74■□□□□ 0.59
C9orf3-222ENST00000496567 MARVELD3Q96A59 401 aa18.74■□□□□ 0.59
C9orf3-222ENST00000496567 BABAM2Q9NXR7 383 aa18.74■□□□□ 0.59
C9orf3-222ENST00000496567 NUFIP1Q9UHK0 495 aaKnown RBP18.74■□□□□ 0.59
C9orf3-222ENST00000496567 TRIM64A6NGJ6 449 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 TBX1O43435 398 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 GPRIN2O60269 458 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 SSTR2P30874 369 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 PSMB10P40306 273 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 MFGE8Q08431 387 aaPredicted RBP18.73■□□□□ 0.59
C9orf3-222ENST00000496567 SNAI3Q3KNW1 292 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 FDX2Q6P4F2 183 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 VHLLQ6RSH7 139 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 SVOPQ8N4V2 548 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 LILRB1Q8NHL6 650 aaPredicted RBP18.73■□□□□ 0.59
C9orf3-222ENST00000496567 GATAD2BQ8WXI9 593 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 PBOV1Q9GZY1 135 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 CLEC4MQ9H2X3 399 aaPredicted RBP18.73■□□□□ 0.59
C9orf3-222ENST00000496567 OR52A1Q9UKL2 312 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 CMAHPQ9Y471 501 aa18.73■□□□□ 0.59
C9orf3-222ENST00000496567 E7EQL1 145 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 H3BSA7 217 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 XRCC2O43543 280 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 ATE1O95260 518 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 THBS4P35443 961 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 ZNF718Q3SXZ3 478 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 CCDC58Q4VC31 144 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 BCL2L15Q5TBC7 163 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 ZNF773Q6PK81 442 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 TMEM200AQ86VY9 491 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 CATSPERDQ86XM0 798 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 ZNF485Q8NCK3 441 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 SLC25A40Q8TBP6 338 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 TMEM171Q8WVE6 324 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 NEUROG1Q92886 237 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 DHRS9Q9BPW9 319 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 OR2J1Q9GZK6 312 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 ZNF696Q9H7X3 374 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 TRIM36Q9NQ86 728 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 G6PC2Q9NQR9 355 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 ZNF391Q9UJN7 358 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 HS3ST1O14792 307 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 GCH1P30793 250 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 TGM4P49221 684 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 ERVS71-1P61550 626 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 TBCEQ15813 527 aaPredicted RBP18.72■□□□□ 0.59
C9orf3-222ENST00000496567 TIGD6Q17RP2 521 aa18.72■□□□□ 0.59
C9orf3-222ENST00000496567 SPATA46Q5T0L3 261 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms