RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 APOC1P02654 83 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 HPXP02790 462 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 LCATP04180 440 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 GIFP27352 417 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 HSD11B1P28845 292 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 GRB2P62993 217 aaKnown RBP13.98□□□□□ -0.17
SF3A1-209ENST00000496189 TMED1Q13445 227 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 EIF2B1Q14232 305 aaKnown RBP13.98□□□□□ -0.17
SF3A1-209ENST00000496189 TSTQ16762 297 aaKnown RBP13.98□□□□□ -0.17
SF3A1-209ENST00000496189 AADACL4Q5VUY2 407 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 MEDAGQ5VYS4 303 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 DPY19L4Q7Z388 723 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 TIGD4Q8IY51 512 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 CMBLQ96DG6 245 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 SLAMF6Q96DU3 332 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 ELMOD3Q96FG2 381 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 ZNF799Q96GE5 643 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 MBOAT4Q96T53 435 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 RNPEPL1Q9HAU8 725 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 FAM118AQ9NWS6 357 aa13.98□□□□□ -0.17
SF3A1-209ENST00000496189 WARS2Q9UGM6 360 aaKnown RBP13.98□□□□□ -0.17
SF3A1-209ENST00000496189 PURGQ9UJV8 347 aaKnown RBP13.98□□□□□ -0.17
SF3A1-209ENST00000496189 SLC16A6O15403 523 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 ACSM4P0C7M7 580 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 KITLGP21583 273 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 RPS27P42677 84 aaKnown RBP13.97□□□□□ -0.17
SF3A1-209ENST00000496189 MAGEB1P43366 347 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 GPR6P46095 362 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-209ENST00000496189 MMP15P51511 669 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 CHN2P52757 468 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 SNRPGP62308 76 aaKnown RBP13.97□□□□□ -0.17
SF3A1-209ENST00000496189 POU4F2Q12837 409 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 PSG7Q13046 419 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 HFEQ30201 348 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 OGFRL1Q5TC84 451 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-209ENST00000496189 TTC23Q5W5X9 447 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 DRAM2Q6UX65 266 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 FBXW12Q6X9E4 464 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 RHOUQ7L0Q8 258 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 SLC16A9Q7RTY1 509 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-209ENST00000496189 HAVCR1Q96D42 359 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 MAP6Q96JE9 813 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 Q96MT0 163 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 ZNF582Q96NG8 517 aaPredicted RBP13.97□□□□□ -0.17
SF3A1-209ENST00000496189 CNN2Q99439 309 aaKnown RBP13.97□□□□□ -0.17
SF3A1-209ENST00000496189 APOL4Q9BPW4 351 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 C1QTNF5Q9BXJ0 243 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 BPESC1Q9GZL8 116 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 YIPF3Q9GZM5 350 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 VCX3BQ9H321 246 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 DDX28Q9NUL7 540 aaKnown RBP13.97□□□□□ -0.17
SF3A1-209ENST00000496189 LAMP5Q9UJQ1 280 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 TMEM14AQ9Y6G1 99 aa13.97□□□□□ -0.17
SF3A1-209ENST00000496189 IGHV1-69-2A0A0G2JMI3 117 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 VWC2LB2RUY7 222 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 SELENOFO60613 162 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 LYNP07948 512 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 TNFRSF1AP19438 455 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 HTR1FP30939 366 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 ATP6V1E1P36543 226 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 NAA10P41227 235 aaPredicted RBP13.96□□□□□ -0.17
SF3A1-209ENST00000496189 GZMKP49863 264 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 TMEM33P57088 247 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 SLC3A1Q07837 685 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 TMEM249Q2WGJ8 235 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 SLC25A30Q5SVS4 291 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 MRPL21Q7Z2W9 205 aaKnown RBP13.96□□□□□ -0.17
SF3A1-209ENST00000496189 ZNF283Q8N7M2 679 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 OTOSQ8NHW6 89 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 THEM6Q8WUY1 208 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 TIMD4Q96H15 378 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 MNTQ99583 582 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 ABHD6Q9BV23 337 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 PNRC2Q9NPJ4 139 aaKnown RBP13.96□□□□□ -0.17
SF3A1-209ENST00000496189 HAO2Q9NYQ3 351 aa13.96□□□□□ -0.17
SF3A1-209ENST00000496189 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.96□□□□□ -0.17
SF3A1-209ENST00000496189 CCDC182A6NF36 153 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 E9PQ18 207 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 LYNX1G3V0Z9 82 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 PPIHO43447 177 aaKnown RBP13.95□□□□□ -0.18
SF3A1-209ENST00000496189 CD5LO43866 347 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 NCR1O76036 304 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 IGHV1-46P01743 117 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 ADH4P08319 380 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 LYNX1P0DP58 116 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 CRYBB2P43320 205 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 TNFAIP6P98066 277 aaPredicted RBP13.95□□□□□ -0.18
SF3A1-209ENST00000496189 CYB5R2Q6BCY4 276 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 KCTD18Q6PI47 426 aaPredicted RBP13.95□□□□□ -0.18
SF3A1-209ENST00000496189 USP51Q70EK9 711 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 PGAP1Q75T13 922 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 BCDIN3DQ7Z5W3 292 aaKnown RBP13.95□□□□□ -0.18
SF3A1-209ENST00000496189 PEG10Q86TG7 708 aaKnown RBP13.95□□□□□ -0.18
SF3A1-209ENST00000496189 DHRSXQ8N5I4 330 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 OR2Z1Q8NG97 314 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 ST7LQ8TDW4 575 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 CYGBQ8WWM9 190 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 KCNJ15Q99712 375 aa13.95□□□□□ -0.18
SF3A1-209ENST00000496189 OPA3Q9H6K4 179 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms