RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 BAIAP2Q9UQB8 552 aa10.72□□□□□ -0.69
PTPRF-214ENST00000496043 A0A1B0GWJ7 208 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 TVP23AA6NH52 213 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 F5H5P2 479 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 TRAPPC2LH3BP13 241 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 M0R135 149 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 HAX1O00165 279 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 RGS9O75916 674 aaPredicted RBP10.71□□□□□ -0.69
PTPRF-214ENST00000496043 DYSFO75923 2080 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 WNT2P09544 360 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 CALB2P22676 271 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 FMO3P31513 532 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 MMP16P51512 607 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 HILS1P60008 231 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 ZNF181Q2M3W8 571 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 ESCO2Q56NI9 601 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 LCN8Q6JVE9 175 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 C12orf54Q6X4T0 127 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 C1orf87Q8N0U7 546 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 LNX2Q8N448 690 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 BPIFB2Q8N4F0 458 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 AQP11Q8NBQ7 271 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 SLC37A3Q8NCC5 494 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 CCDC197Q8NCU1 140 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 SEMA6DQ8NFY4 1073 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 ZNF420Q8TAQ5 688 aaPredicted RBP10.71□□□□□ -0.69
PTPRF-214ENST00000496043 SPRYD4Q8WW59 207 aaPredicted RBP10.71□□□□□ -0.69
PTPRF-214ENST00000496043 ERGIC1Q969X5 290 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 ZNF799Q96GE5 643 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 MAP6Q96JE9 813 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 DGCR6LQ9BY27 220 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 PLA2G12AQ9BZM1 189 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 SLC22A4Q9H015 551 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 REEP1Q9H902 201 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 MMP26Q9NRE1 261 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 TBC1D23Q9NUY8 699 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 MIOXQ9UGB7 285 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 SAMHD1Q9Y3Z3 626 aaKnown RBP10.71□□□□□ -0.69
PTPRF-214ENST00000496043 AUP1Q9Y679 476 aa10.71□□□□□ -0.69
PTPRF-214ENST00000496043 IGHV3-64DA0A0J9YX35 117 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 F5H0A9 414 aaPredicted RBP10.7□□□□□ -0.7
PTPRF-214ENST00000496043 ZNF593O00488 134 aaPredicted RBP10.7□□□□□ -0.7
PTPRF-214ENST00000496043 MLNRO43193 412 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 FSTL3O95633 263 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 FAM107AO95990 144 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 CYB5R3P00387 301 aaPredicted RBP10.7□□□□□ -0.7
PTPRF-214ENST00000496043 HLA-DPB1P04440 258 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 IRF2P14316 349 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 ZNF12P17014 697 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 RAD23AP54725 363 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 ZNF154Q13106 437 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 TAF13Q15543 124 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 MRPL21Q7Z2W9 205 aaKnown RBP10.7□□□□□ -0.7
PTPRF-214ENST00000496043 DCXRQ7Z4W1 244 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 MOGAT3Q86VF5 341 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 CELF2-AS1Q8N7Q2 184 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 OR2T33Q8NG76 320 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 OR51L1Q8NGJ5 315 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 OR8D4Q8NGM9 314 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 FAM216AQ8WUB2 273 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 ZNRF4Q8WWF5 429 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 LRGUKQ96M69 825 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 RBM4Q9BWF3 364 aaKnown RBP10.7□□□□□ -0.7
PTPRF-214ENST00000496043 NTN4Q9HB63 628 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 PRPF19Q9UMS4 504 aaKnown RBP10.7□□□□□ -0.7
PTPRF-214ENST00000496043 LRCH1Q9Y2L9 728 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 NOP16Q9Y3C1 178 aaKnown RBP10.7□□□□□ -0.7
PTPRF-214ENST00000496043 PPIAL4AQ9Y536 164 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 INSIG2Q9Y5U4 225 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 U3KQV3 271 aa10.7□□□□□ -0.7
PTPRF-214ENST00000496043 FBN3Q75N90 2809 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 GGT3PA6NGU5 568 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 CEACAM18A8MTB9 384 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 A8MXK9 166 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 GMDSO60547 372 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 ZNF205O95201 554 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 FSHBP01225 129 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 IFNGP01579 166 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 T-ENOLP0DO92 83 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 RAP2AP10114 183 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 PMELP40967 661 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 RPS27P42677 84 aaKnown RBP10.69□□□□□ -0.7
PTPRF-214ENST00000496043 GATA4P43694 442 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 ENTPD1P49961 510 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 BLVRAP53004 296 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 SLC25A1P53007 311 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 SEC61A1P61619 476 aaKnown RBP10.69□□□□□ -0.7
PTPRF-214ENST00000496043 MAB21L1Q13394 359 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 CRMP1Q14194 572 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 GK3PQ14409 553 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 OR8G1Q15617 311 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 TEX30Q5JUR7 227 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 DRAM2Q6UX65 266 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 CD300LDQ6UXZ3 194 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 ZNF511Q8NB15 262 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 DEFB108BQ8NET1 73 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 OR10S1Q8NGN2 331 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 OR9Q1Q8NGQ5 310 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 OR11L1Q8NGX0 322 aa10.69□□□□□ -0.7
PTPRF-214ENST00000496043 GCDHQ92947 438 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms