RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	ST7L	Q8TDW4	575 aa		10.53	□□□□□ -0.72
MRPL55-233	ENST00000495899	SLAMF6	Q96DU3	332 aa		10.53	□□□□□ -0.72
MRPL55-233	ENST00000495899	RAB3IP	Q96QF0	476 aa	Predicted RBP	10.53	□□□□□ -0.72
MRPL55-233	ENST00000495899	BPESC1	Q9GZL8	116 aa		10.53	□□□□□ -0.72
MRPL55-233	ENST00000495899	EGLN1	Q9GZT9	426 aa		10.53	□□□□□ -0.72
MRPL55-233	ENST00000495899	OR51V1	Q9H2C8	321 aa		10.53	□□□□□ -0.72
MRPL55-233	ENST00000495899	POFUT1	Q9H488	388 aa		10.53	□□□□□ -0.72
MRPL55-233	ENST00000495899	MED20	Q9H944	212 aa		10.53	□□□□□ -0.72
MRPL55-233	ENST00000495899	ZSCAN5B	A6NJL1	495 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	ZNF878	C9JN71	531 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	LYNX1	G3V0Z9	82 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899		M0R135	149 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	TPD52L2	O43399	206 aa	Known RBP	10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	SPRY3	O43610	288 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	NCR1	O76036	304 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	APOC1	P02654	83 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	LCAT	P04180	440 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	RPLP1	P05386	114 aa	Known RBP	10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	LYNX1	P0DP58	116 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	SELE	P16581	610 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	GZMK	P49863	264 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	CHN2	P52757	468 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	GRB2	P62993	217 aa	Known RBP	10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	EFNB1	P98172	346 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	GGTLC2	Q14390	218 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	TAF13	Q15543	124 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	SLX4IP	Q5VYV7	408 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899		Q71RC1	249 aa	Predicted RBP	10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	CXXC5	Q7LFL8	322 aa	Known RBP	10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	DPY19L4	Q7Z388	723 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	ERI1	Q8IV48	349 aa	Known RBP	10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	TIGD4	Q8IY51	512 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	PYDC1	Q8WXC3	89 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	ZNF799	Q96GE5	643 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	ZNF582	Q96NG8	517 aa	Predicted RBP	10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	KCNJ15	Q99712	375 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	SEMA6A	Q9H2E6	1030 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	TOR3A	Q9H497	397 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	SAP30L	Q9HAJ7	183 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	TVP23B	Q9NYZ1	205 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	PTTG3P	Q9NZH4	202 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	OAZ3	Q9UMX2	235 aa		10.52	□□□□□ -0.73
MRPL55-233	ENST00000495899	IGHV4-61	A0A0C4DH41	118 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	IGHV1-69-2	A0A0G2JMI3	117 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	ZAR1L	A6NP61	321 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899		H3BNX3	289 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	MITF	O75030	526 aa	Predicted RBP	10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	RP2	O75695	350 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	VSIG8	P0DPA2	414 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	PSKH1	P11801	424 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	SLC2A5	P22732	501 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	TNFSF4	P23510	183 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	IGFBP5	P24593	272 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	PPP2R2B	Q00005	443 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	EIF2B1	Q14232	305 aa	Known RBP	10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	HLX	Q14774	488 aa	Predicted RBP	10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	TST	Q16762	297 aa	Known RBP	10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	HFE	Q30201	348 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	KLHL12	Q53G59	568 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	CYB5R2	Q6BCY4	276 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	NAA40	Q86UY6	237 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	OR8G5	Q8NG78	346 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	OR6N2	Q8NGY6	317 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	OTOS	Q8NHW6	89 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	RNF133	Q8WVZ7	376 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	GTF3A	Q92664	365 aa	Known RBP	10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	YIPF5	Q969M3	257 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	ZMYND19	Q96E35	227 aa	Predicted RBP	10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	ELMOD3	Q96FG2	381 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	TEAD3	Q99594	435 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	RBM4B	Q9BQ04	359 aa	Known RBP	10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	COPS4	Q9BT78	406 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	ABHD6	Q9BV23	337 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	SP140L	Q9H930	580 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	MSL2	Q9HCI7	577 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	ZNF275	Q9NSD4	429 aa	Predicted RBP	10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	CENPM	Q9NSP4	180 aa		10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899	TMEFF2	Q9UIK5	374 aa	Predicted RBP	10.51	□□□□□ -0.73
MRPL55-233	ENST00000495899		A0A1B0GWJ7	208 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	IQCF6	A8MYZ5	107 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	IGHV4-31	P0DP07	118 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	TNFRSF1A	P19438	455 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	GPR6	P46095	362 aa	Predicted RBP	10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	SLC6A9	P48067	706 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	TNFAIP6	P98066	277 aa	Predicted RBP	10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	SLC3A1	Q07837	685 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	GK2	Q14410	553 aa	Predicted RBP	10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	C12orf73	Q69YU5	71 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	USP51	Q70EK9	711 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	PGAP1	Q75T13	922 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	OR13G1	Q8NGZ3	307 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	CIB1	Q99828	191 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	PKP2	Q99959	881 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	GABARAPL3	Q9BY60	117 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	YIPF3	Q9GZM5	350 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	IL19	Q9UHD0	177 aa		10.5	□□□□□ -0.73
MRPL55-233	ENST00000495899	NSD1	Q96L73	2696 aa	Predicted RBP	10.49	□□□□□ -0.73
MRPL55-233	ENST00000495899	PPIH	O43447	177 aa	Known RBP	10.49	□□□□□ -0.73
MRPL55-233	ENST00000495899	PRKY	O43930	277 aa		10.49	□□□□□ -0.73
MRPL55-233	ENST00000495899	CDC14B	O60729	498 aa		10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms