RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 C3orf80F5H4A9 247 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 LGALS8O00214 317 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 NDUFA2O43678 99 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 SDHAP31040 664 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 PRSS12P56730 875 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 ARF6P62330 175 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 CLEC12AQ5QGZ9 265 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 AGBL2Q5U5Z8 902 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 GPR139Q6DWJ6 353 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 PGM2L1Q6PCE3 622 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 DNM1P34Q6PK57 102 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 Q6ZSV7 163 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 MBOAT2Q6ZWT7 520 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 FAM122BQ7Z309 247 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 LDLRAD3Q86YD5 345 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 PDZD9Q8IXQ8 264 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 ZSCAN4Q8NAM6 433 aaPredicted RBP11.8□□□□□ -0.52
VARS-228ENST00000495010 FAM156AQ8NDB6 213 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 SLC22A4Q9H015 551 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 CTSZQ9UBR2 303 aa11.8□□□□□ -0.52
VARS-228ENST00000495010 A0A087WUU8 490 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 C5orf63A6NC05 138 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 F5H5K5 113 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 J3KTA2 159 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 SOCS2O14508 198 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 CDC42EP2O14613 210 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 NDUFB2O95178 105 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 NPPAP01160 153 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 LCATP04180 440 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 GK2Q14410 553 aaPredicted RBP11.79□□□□□ -0.52
VARS-228ENST00000495010 MPPED2Q15777 294 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 KCNMB1Q16558 191 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 TBPL2Q6SJ96 375 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 TMPRSS11FQ6ZWK6 438 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 PGAP1Q75T13 922 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 ADCK1Q86TW2 530 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 OR2T12Q8NG77 320 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 SLCO4A1Q96BD0 722 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 NUAK2Q9H093 628 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 RASSF4Q9H2L5 321 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 C16orf95Q9H693 158 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 VSX1Q9NZR4 365 aaPredicted RBP11.79□□□□□ -0.52
VARS-228ENST00000495010 AURKCQ9UQB9 309 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 TMEM5Q9Y2B1 443 aa11.79□□□□□ -0.52
VARS-228ENST00000495010 A0A0G2JND7 137 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 A0A1B0GWJ7 208 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 FAM220BPB1ANY3 271 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 MRASO14807 208 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 ECDO95905 644 aaPredicted RBP11.78□□□□□ -0.52
VARS-228ENST00000495010 CA6P23280 308 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 CRABP1P29762 137 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 RPS6KA3P51812 740 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 MEP1BQ16820 701 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 CORO6Q6QEF8 472 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 BTN2A1Q7KYR7 527 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 MRPL21Q7Z2W9 205 aaKnown RBP11.78□□□□□ -0.52
VARS-228ENST00000495010 CYP4Z1Q86W10 505 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 OR2AJ1Q8NGZ0 328 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 PITX2Q99697 317 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 CNTD2Q9H8S5 307 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 GID8Q9NWU2 228 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 IER3IP1Q9Y5U9 82 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 SNX13Q9Y5W8 968 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 LHFPL6Q9Y693 200 aa11.78□□□□□ -0.52
VARS-228ENST00000495010 ZNF816-ZNF321PA0A0X1KG74 233 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 ANKRD61A6NGH8 418 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 OOEPA6NGQ2 149 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 GMDSO60547 372 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 ZNF682O95780 498 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 GYPAP02724 150 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 FBP1P09467 338 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 ACSM4P0C7M7 580 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 FUT4P22083 530 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 TGFBR2P37173 567 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 HIST1H3AP68431 136 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 HOXA4Q00056 320 aaPredicted RBP11.77□□□□□ -0.53
VARS-228ENST00000495010 EGR3Q06889 387 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 ECH1Q13011 328 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 COQ5Q5HYK3 327 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 HIST2H3PS2Q5TEC6 136 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 METTL21CQ5VZV1 264 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 COLCA1Q6ZS62 124 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 Q6ZTK2 550 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 HIST2H3AQ71DI3 136 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 FKBP9P1Q75LS8 142 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 VMO1Q7Z5L0 202 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 VTCN1Q7Z7D3 282 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 ST8SIA4Q92187 359 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 FAM46AQ96IP4 442 aaKnown RBP11.77□□□□□ -0.53
VARS-228ENST00000495010 SIKE1Q9BRV8 207 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 ADAT1Q9BUB4 502 aaKnown RBP11.77□□□□□ -0.53
VARS-228ENST00000495010 TMEM120AQ9BXJ8 343 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 SMURF1Q9HCE7 757 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 NRIP3Q9NQ35 241 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 INTS9Q9NV88 658 aaKnown RBP11.77□□□□□ -0.53
VARS-228ENST00000495010 C1orf123Q9NWV4 160 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 ONECUT1Q9UBC0 465 aa11.77□□□□□ -0.53
VARS-228ENST00000495010 A0A1B0GVI7 797 aa11.76□□□□□ -0.53
VARS-228ENST00000495010 hCG_1807616A0A1W2PRN6 198 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms