RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SLC35F2Q8IXU6 374 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 ENTHD1Q8IYW4 607 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF525Q8N782 197 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF555Q8NEP9 628 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 RHOXF1Q8NHV9 184 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 SNX33Q8WV41 574 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 N6AMT1Q9Y5N5 214 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 TMEM14AQ9Y6G1 99 aa11.56□□□□□ -0.56
COL1A1-208ENST00000494334 TRIM64A6NGJ6 449 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 TRIM64BA6NI03 449 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 PRR32B1ATL7 298 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 PSMD9O00233 223 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 TIMM8AO60220 97 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-208ENST00000494334 ERCC1P07992 297 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-208ENST00000494334 LIPAP38571 399 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 MAGEB1P43366 347 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF81P51508 661 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 POU4F2Q12837 409 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 TNK1Q13470 666 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 GK2Q14410 553 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-208ENST00000494334 OR2T2Q6IF00 324 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 KCTD18Q6PI47 426 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-208ENST00000494334 USP51Q70EK9 711 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 PRSS45Q7RTY3 260 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 KRT77Q7Z794 578 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-208ENST00000494334 RFKQ969G6 155 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 MNTQ99583 582 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 TMUB1Q9BVT8 246 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 RNPEPL1Q9HAU8 725 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 CYSLTR2Q9NS75 346 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 CLN6Q9NWW5 311 aa11.55□□□□□ -0.56
COL1A1-208ENST00000494334 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL1A1-208ENST00000494334 PLSCR5A0PG75 271 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 ZSCAN5BA6NJL1 495 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 H0YHG0 523 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 SPRY3O43610 288 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 MPZL2O60487 215 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 NCR1O76036 304 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 APOL3O95236 402 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 CLIC3O95833 236 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 IGHV1-46P01743 117 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 APOC1P02654 83 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 HPXP02790 462 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 MT-ND5P03915 603 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 ANXA2P07355 339 aaKnown RBP11.54□□□□□ -0.56
COL1A1-208ENST00000494334 CD99P14209 185 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 DAOP14920 347 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 PRSS12P56730 875 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF121P58317 390 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-208ENST00000494334 DSCR9P59020 149 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 CXCR4P61073 352 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 ROM1Q03395 351 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF92Q03936 586 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 MALLQ13021 153 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 GLYATL3Q5SZD4 288 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 DEGS2Q6QHC5 323 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 CLEC2AQ6UVW9 174 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 Q6ZR03 302 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 PGAP1Q75T13 922 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF679Q8IYX0 411 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 OR5AS1Q8N127 324 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 RFLNBQ8N5W9 214 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 OR2AE1Q8NHA4 323 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 ASB17Q8WXJ9 295 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 OR8B4Q96RC9 309 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 MROQ9BYG7 248 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 TTTY10Q9BZA0 68 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 NIPAL2Q9H841 368 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 MSL2Q9HCI7 577 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 NKIRAS2Q9NYR9 191 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF319Q9P2F9 582 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 CGGBP1Q9UFW8 167 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-208ENST00000494334 LRP12Q9Y561 859 aa11.54□□□□□ -0.56
COL1A1-208ENST00000494334 IGHV4-30-2A0A087WSY4 118 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 IQCF6A8MYZ5 107 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF670-ZNF695F2Z2N8 137 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 PHYHO14832 338 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 MAGEB4O15481 346 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-208ENST00000494334 TBX1O43435 398 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 OR2T7P0C7T2 308 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 ATP6V1E1P36543 226 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 MTNR1AP48039 350 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 PDLIM4P50479 330 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 ADARB1P78563 741 aaKnown RBP11.53□□□□□ -0.56
COL1A1-208ENST00000494334 CCL8P80075 99 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 TSTQ16762 297 aaKnown RBP11.53□□□□□ -0.56
COL1A1-208ENST00000494334 PCGF3Q3KNV8 242 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF691Q5VV52 312 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 TTC23Q5W5X9 447 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF322Q6U7Q0 402 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-208ENST00000494334 FAM57BQ71RH2 274 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 ZNF771Q7L3S4 317 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-208ENST00000494334 SSX6Q7RTT6 188 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 CIARTQ8N365 385 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-208ENST00000494334 DHRSXQ8N5I4 330 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 OR8G5Q8NG78 346 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 OR2T27Q8NH04 317 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 C10orf105Q8TEF2 133 aa11.53□□□□□ -0.56
COL1A1-208ENST00000494334 UBASH3BQ8TF42 649 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms