RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 RERGLQ9H628 205 aa6.88□□□□□ -1.31
RIF1-211ENST00000494333 HINT3Q9NQE9 182 aaKnown RBP6.88□□□□□ -1.31
RIF1-211ENST00000494333 TBCCD1Q9NVR7 557 aa6.88□□□□□ -1.31
RIF1-211ENST00000494333 LPAR3Q9UBY5 353 aa6.88□□□□□ -1.31
RIF1-211ENST00000494333 IL20RAQ9UHF4 553 aa6.88□□□□□ -1.31
RIF1-211ENST00000494333 TAGLN3Q9UI15 199 aa6.88□□□□□ -1.31
RIF1-211ENST00000494333 AURKCQ9UQB9 309 aa6.88□□□□□ -1.31
RIF1-211ENST00000494333 SIGLEC7Q9Y286 467 aa6.88□□□□□ -1.31
RIF1-211ENST00000494333 ARL2BPQ9Y2Y0 163 aa6.88□□□□□ -1.31
RIF1-211ENST00000494333 V9GYQ6 96 aa6.88□□□□□ -1.31
RIF1-211ENST00000494333 SONP18583 2426 aaKnown RBP6.88□□□□□ -1.31
RIF1-211ENST00000494333 TEX13CA0A0J9YWL9 993 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 PRSS37A4D1T9 235 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 C12orf71A8MTZ7 269 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 TPD52L2O43399 206 aaKnown RBP6.87□□□□□ -1.31
RIF1-211ENST00000494333 PPIHO43447 177 aaKnown RBP6.87□□□□□ -1.31
RIF1-211ENST00000494333 AHCYL1O43865 530 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 SLC16A7O60669 478 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 GADD45GO95257 159 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 NGFP01138 241 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 IGHV3-13P01766 116 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 MT-ND5P03915 603 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 HSD17B1P14061 328 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 GATA3P23771 443 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 OMPP47874 163 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 GLO1Q04760 184 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 CCNIQ14094 377 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 FHL2Q14192 279 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 ENDOGQ14249 297 aaKnown RBP6.87□□□□□ -1.31
RIF1-211ENST00000494333 ZNF718Q3SXZ3 478 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 FAM120AOSQ5T036 256 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 OTPQ5XKR4 325 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 ZNF774Q6NX45 483 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 ARL9Q6T311 187 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 Q6YL49 198 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 FOXL2NBQ6ZUU3 175 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 IL17RELQ6ZVW7 336 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 FAM122BQ7Z309 247 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 DEFB107AQ8IZN7 70 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 PGAM4Q8N0Y7 254 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 SLC25A40Q8TBP6 338 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 KLF14Q8TD94 323 aaPredicted RBP6.87□□□□□ -1.31
RIF1-211ENST00000494333 MCUR1Q96AQ8 359 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 RASD2Q96D21 266 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 C4orf45Q96LM5 186 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 NSMCE2Q96MF7 247 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 OR2J1Q9GZK6 312 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 NDEL1Q9GZM8 345 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 SYT4Q9H2B2 425 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 TMPRSS5Q9H3S3 457 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 NARFLQ9H6Q4 476 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 KRCC1Q9NPI7 259 aaPredicted RBP6.87□□□□□ -1.31
RIF1-211ENST00000494333 NRIP3Q9NQ35 241 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 POLE4Q9NR33 117 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 ZNF275Q9NSD4 429 aaPredicted RBP6.87□□□□□ -1.31
RIF1-211ENST00000494333 DECR2Q9NUI1 292 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 ARL8BQ9NVJ2 186 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 CD300AQ9UGN4 299 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 IER3IP1Q9Y5U9 82 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 ZANQ9Y493 2812 aa6.87□□□□□ -1.31
RIF1-211ENST00000494333 PLSCR5A0PG75 271 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 RNF212BA8MTL3 300 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 SOCS2O14508 198 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 IMPA2O14732 288 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 WNT9BO14905 357 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 SPRY3O43610 288 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 OR10H3O60404 316 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 KHDRBS3O75525 346 aaKnown RBP6.86□□□□□ -1.31
RIF1-211ENST00000494333 DCTN3O75935 186 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 MPZL1O95297 269 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 CTLA4P16410 223 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 SRD5A1P18405 259 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 HNF1AP20823 631 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 MPV17P39210 176 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 CDKN2AP42771 156 aaKnown RBP6.86□□□□□ -1.31
RIF1-211ENST00000494333 CRYBB2P43320 205 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 CENPAP49450 140 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 ZNF81P51508 661 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 RPS6KA3P51812 740 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 UCP3P55916 312 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 SMIM11AP58511 58 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 FXYD6P3P58550 94 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 PPP1CBP62140 327 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 MRPS11P82912 194 aaKnown RBP6.86□□□□□ -1.31
RIF1-211ENST00000494333 SPIBQ01892 262 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 KRR1Q13601 381 aaKnown RBP6.86□□□□□ -1.31
RIF1-211ENST00000494333 HLXQ14774 488 aaPredicted RBP6.86□□□□□ -1.31
RIF1-211ENST00000494333 TSTQ16762 297 aaKnown RBP6.86□□□□□ -1.31
RIF1-211ENST00000494333 PCGF3Q3KNV8 242 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 SAMD4BQ5PRF9 694 aaKnown RBP6.86□□□□□ -1.31
RIF1-211ENST00000494333 GPR139Q6DWJ6 353 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 C16orf89Q6UX73 402 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 DPY19L2P2Q6ZN68 376 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 ZER1Q7Z7L7 766 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 C1orf174Q8IYL3 243 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 CLDND2Q8NHS1 167 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 LRTOMTQ8WZ04 291 aa6.86□□□□□ -1.31
RIF1-211ENST00000494333 GTF3AQ92664 365 aaKnown RBP6.86□□□□□ -1.31
RIF1-211ENST00000494333 RSRC1Q96IZ7 334 aaKnown RBP6.86□□□□□ -1.31
RIF1-211ENST00000494333 GPX7Q96SL4 187 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms