RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 C1QTNF5Q9BXJ0 243 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 BEX2Q9BXY8 128 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 EGLN1Q9GZT9 426 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 ZDHHC8Q9ULC8 765 aa12.45□□□□□ -0.42
ATG4B-224ENST00000494132 ISPDA4D126 451 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 PRR23D1E9PI22 279 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-224ENST00000494132 J3QW42 95 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 M0R129 80 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 SURF4O15260 269 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 SELENOFO60613 162 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 GLCEO94923 617 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 HLA-DPB1P04440 258 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 CD55P08174 381 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 PRR23D2P0DMB1 279 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-224ENST00000494132 SELEP16581 610 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 TUBG1P23258 451 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 CDK5Q00535 292 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 TAF13Q15543 124 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 ATP6AP1Q15904 470 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 CR1LQ2VPA4 569 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 KLHL12Q53G59 568 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 FAM120AOSQ5T036 256 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 CPOQ8IVL8 374 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 OR5K1Q8NHB7 308 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 ST7LQ8TDW4 575 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 LRTOMTQ8WZ04 291 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 HPS1Q92902 700 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 SPTSSAQ969W0 71 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 OR2V2Q96R30 315 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 INTS14Q96SY0 518 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 AMELYQ99218 206 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 SHARPINQ9H0F6 387 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 SEMA6AQ9H2E6 1030 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 TUBG2Q9NRH3 451 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 PAPOLBQ9NRJ5 636 aaKnown RBP12.44□□□□□ -0.42
ATG4B-224ENST00000494132 DDX28Q9NUL7 540 aaKnown RBP12.44□□□□□ -0.42
ATG4B-224ENST00000494132 SVEP1Q4LDE5 3571 aa12.44□□□□□ -0.42
ATG4B-224ENST00000494132 F5H5P2 479 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 MLNRO43193 412 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 PAICSP22234 425 aaKnown RBP12.43□□□□□ -0.42
ATG4B-224ENST00000494132 TNFSF4P23510 183 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 GSTT1P30711 240 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 NAA10P41227 235 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-224ENST00000494132 CRISP1P54107 249 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 LMO4P61968 165 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 RPS7P62081 194 aaKnown RBP12.43□□□□□ -0.42
ATG4B-224ENST00000494132 PCK2Q16822 640 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 GLYATL3Q5SZD4 288 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 FAHD1Q6P587 224 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 MRPL21Q7Z2W9 205 aaKnown RBP12.43□□□□□ -0.42
ATG4B-224ENST00000494132 ZNF283Q8N7M2 679 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 OR8G5Q8NG78 346 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 ZNF420Q8TAQ5 688 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-224ENST00000494132 PLEKHA8Q96JA3 519 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 ZNF582Q96NG8 517 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-224ENST00000494132 DIRC2Q96SL1 478 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 MMADHCQ9H3L0 296 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-224ENST00000494132 SLC25A19Q9HC21 320 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 TVP23BQ9NYZ1 205 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 UBAP1Q9NZ09 502 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 DNAJC27Q9NZQ0 273 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 AP4S1Q9Y587 144 aa12.43□□□□□ -0.42
ATG4B-224ENST00000494132 IQCF6A8MYZ5 107 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 ZNF878C9JN71 531 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 CIB2O75838 187 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 HMGN1P05114 100 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 FASP25445 335 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 EPHA2P29317 976 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 OTX1P32242 354 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-224ENST00000494132 ZNF92Q03936 586 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 MALLQ13021 153 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 SNAPC1Q16533 368 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 TEX30Q5JUR7 227 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 PGAP1Q75T13 922 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 CXXC5Q7LFL8 322 aaKnown RBP12.42□□□□□ -0.42
ATG4B-224ENST00000494132 TIGD4Q8IY51 512 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 RAB1CQ92928 201 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 DVL3Q92997 716 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-224ENST00000494132 NRBF2Q96F24 287 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 TIMD4Q96H15 378 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 KCNJ15Q99712 375 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 GAL3ST1Q99999 423 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 ABHD6Q9BV23 337 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 ZNF665Q9H7R5 613 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 TMEM106BQ9NUM4 274 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 TMEM160Q9NX00 188 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 CDC42EP3Q9UKI2 254 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 KLHDC2Q9Y2U9 406 aa12.42□□□□□ -0.42
ATG4B-224ENST00000494132 G3V2T6 193 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 TBX1O43435 398 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 ZNF205O95201 554 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 ANXA2P07355 339 aaKnown RBP12.41□□□□□ -0.42
ATG4B-224ENST00000494132 TNFRSF1AP19438 455 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 HSD11B1P28845 292 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 CX3CR1P49238 355 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 MMP16P51512 607 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 BLVRAP53004 296 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 PTGES3Q15185 160 aaKnown RBP12.41□□□□□ -0.42
ATG4B-224ENST00000494132 DRAM2Q6UX65 266 aa12.41□□□□□ -0.42
ATG4B-224ENST00000494132 CCDC121Q6ZUS5 278 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms