RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ATPAF1Q5TC12 328 aaPredicted RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 PRAMEF17Q5VTA0 474 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 RHBDD2Q6NTF9 364 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 FAAP20Q6NZ36 180 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 C3orf33Q6P1S2 294 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 ZNF529Q6P280 563 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 FAM122CQ6P4D5 195 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 DCXRQ7Z4W1 244 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 OR1M1Q8NGA1 313 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 OR56B1Q8NGI3 324 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 OR2AJ1Q8NGZ0 328 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 OR10AC1Q8NH08 325 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 STOML3Q8TAV4 291 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 SLC22A8Q8TCC7 542 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 TSLPQ969D9 159 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 C5orf34Q96MH7 638 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 LMF1Q96S06 567 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 VRK1Q99986 396 aaPredicted RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 NMES1Q9C002 83 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 CST11Q9H112 138 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 ZNF768Q9H5H4 540 aaKnown RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 CDCP1Q9H5V8 836 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.26□□□□□ -0.77
RFC4-214ENST00000494047 KLHL13Q9P2N7 655 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 ANAPC10Q9UM13 185 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 SLC22A13Q9Y226 551 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 COA3Q9Y2R0 106 aaPredicted RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 MEMO1Q9Y316 297 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 EMC9Q9Y3B6 208 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 TMEM184BQ9Y519 407 aaPredicted RBP10.26□□□□□ -0.77
RFC4-214ENST00000494047 KCNMB2Q9Y691 235 aa10.26□□□□□ -0.77
RFC4-214ENST00000494047 A0A087WZY1 265 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 AGRPO00253 132 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 STK17BO94768 372 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 GP1BAP07359 652 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 CTSBP07858 339 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 HOXD4P09016 255 aaPredicted RBP10.25□□□□□ -0.77
RFC4-214ENST00000494047 GIMD1P0DJR0 217 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 TPT1P13693 172 aaKnown RBP10.25□□□□□ -0.77
RFC4-214ENST00000494047 NAT1P18440 290 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 PRKACBP22694 351 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 LAP3P28838 519 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 EFNB2P52799 333 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 TAS2R46P59540 309 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 IL13RA1P78552 427 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 SORDQ00796 357 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 KCNMB1Q16558 191 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 ZNF260Q3ZCT1 412 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 PAN3Q58A45 887 aaKnown RBP10.25□□□□□ -0.77
RFC4-214ENST00000494047 ZNF660Q6AZW8 331 aaPredicted RBP10.25□□□□□ -0.77
RFC4-214ENST00000494047 LRFN4Q6PJG9 635 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 ZNF813Q6ZN06 617 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 LRRC69Q6ZNQ3 347 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 MOB3CQ70IA8 216 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 BPHLQ86WA6 291 aaPredicted RBP10.25□□□□□ -0.77
RFC4-214ENST00000494047 LYPD6Q86Y78 171 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 UEVLDQ8IX04 471 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 GALNT16Q8N428 558 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 COQ8AQ8NI60 647 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 DUSP19Q8WTR2 217 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 SLC7A5P2Q9GIP4 190 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 VN1R1Q9GZP7 353 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 CCDC86Q9H6F5 360 aaKnown RBP10.25□□□□□ -0.77
RFC4-214ENST00000494047 HDGFL3Q9Y3E1 203 aa10.25□□□□□ -0.77
RFC4-214ENST00000494047 RNF222A6NCQ9 220 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 H0YC42 278 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 YKT6O15498 198 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 PIAS2O75928 621 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 KDM4BO94953 1096 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 ONECUT2O95948 504 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 PNPP00491 289 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 PLGP00747 810 aaPredicted RBP10.24□□□□□ -0.77
RFC4-214ENST00000494047 ZNF735P0CB33 412 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 CTRB1P17538 263 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 CCL1P22362 96 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 ZBTB25P24278 435 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 GUCA1AP43080 201 aaPredicted RBP10.24□□□□□ -0.77
RFC4-214ENST00000494047 OR1D4P47884 311 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 MFGE8Q08431 387 aaPredicted RBP10.24□□□□□ -0.77
RFC4-214ENST00000494047 SQSTM1Q13501 440 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 CDNFQ49AH0 187 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 TMEM128Q5BJH2 165 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 CTRB2Q6GPI1 263 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 TMEM81Q6P7N7 255 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 ALKAL2Q6UX46 152 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 TFAP2EQ6VUC0 442 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 DOK3Q7L591 496 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 TMED4Q7Z7H5 227 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 TRAPPC6BQ86SZ2 158 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 NAA40Q86UY6 237 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 METTL27Q8N6F8 245 aaPredicted RBP10.24□□□□□ -0.77
RFC4-214ENST00000494047 NOXO1Q8NFA2 376 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 OR52B4Q8NGK2 314 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 OR10R2Q8NGX6 335 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 OR8S1Q8NH09 359 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 OR1S1Q8NH92 325 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 OR1L3Q8NH93 324 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 SLAMF6Q96DU3 332 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 WBP1Q96G27 269 aa10.24□□□□□ -0.77
RFC4-214ENST00000494047 CCDC120Q96HB5 630 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms