RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 RNF212BA8MTL3 300 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 SOCS6O14544 535 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 TNFSF12O43508 249 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 DGKAP23743 735 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 HINT1P49773 126 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CCR5P51681 352 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 STC1P52823 247 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 RANP62826 216 aaKnown RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 GUCA2AQ02747 115 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CLLU1OSQ5K130 101 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 AWAT2Q6E213 333 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 NOXRED1Q6NXP6 359 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 STEAP1BQ6NZ63 245 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 RPUSD3Q6P087 351 aaKnown RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 CLDN19Q8N6F1 224 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 FBXO22Q8NEZ5 403 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 OR10W1Q8NGF6 305 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 SLC7A13Q8TCU3 470 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 RNASEH2CQ8TDP1 164 aaKnown RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 LIPHQ8WWY8 451 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 ZCCHC14Q8WYQ9 949 aaKnown RBP6.19□□□□□ -1.42
VPS13B-205ENST00000493587 APH1AQ96BI3 265 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 C4orf36Q96KX1 117 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 OR5B2Q96R09 309 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 SLCO5A1Q9H2Y9 848 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 PLEKHA1Q9HB21 404 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 POPDC3Q9HBV1 291 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 STEAP1Q9UHE8 339 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 SLC25A13Q9UJS0 675 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 KCNK6Q9Y257 313 aa6.19□□□□□ -1.42
VPS13B-205ENST00000493587 ASGR2P07307 311 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 CTSLP07711 333 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 KLK2P20151 261 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 PNPLA4P41247 253 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 LIMS1P48059 325 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 TGM3Q08188 693 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 ST3GAL3Q11203 375 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 ENDOGQ14249 297 aaKnown RBP6.18□□□□□ -1.42
VPS13B-205ENST00000493587 RAB35Q15286 201 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM41BQ5BJD5 291 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF679Q8IYX0 411 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 SLC26A10Q8NG04 563 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 OR4D6Q8NGJ1 314 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 ADAMTS18Q8TE60 1221 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 HAS2Q92819 552 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 PARP11Q9NR21 331 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 PLSCR4Q9NRQ2 329 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 FBXW11Q9UKB1 542 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 LOC105371242A0A075B767 164 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 ZC3H12DA2A288 527 aaKnown RBP6.18□□□□□ -1.42
VPS13B-205ENST00000493587 MYBPHLA2RUH7 354 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 H0YL77 283 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 GAPDHSO14556 408 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-205ENST00000493587 RBMXL2O75526 392 aaKnown RBP6.18□□□□□ -1.42
VPS13B-205ENST00000493587 IGHA1P01876 353 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 HSD3B2P26439 372 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 CCKARP32238 428 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 VEGFBP49765 207 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 MMP16P51512 607 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 LIM2P55344 173 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 HIST1H3AP68431 136 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM205Q6UW68 189 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 BTNL8Q6UX41 500 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 Q6ZN92 141 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 HMGN2P46Q86SG4 172 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 MYPOPQ86VE0 399 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-205ENST00000493587 RBM45Q8IUH3 476 aaKnown RBP6.18□□□□□ -1.42
VPS13B-205ENST00000493587 C17orf47Q8NEP4 570 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 OR4K2Q8NGD2 314 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 OR4K14Q8NGD5 310 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 PCED1BQ96HM7 432 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 WRAP53Q9BUR4 548 aaKnown RBP6.18□□□□□ -1.42
VPS13B-205ENST00000493587 PLA2G12AQ9BZM1 189 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 OR6C3Q9NZP0 311 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 CNIH4Q9P003 139 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 SLC13A4Q9UKG4 626 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 HEATR5AQ86XA9 2040 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 H3BSH0 61 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 H7C417 338 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 GPRIN2O60269 458 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 GPR37L1O60883 481 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 SERPINA7P05543 415 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 NBEAP1P0C6P0 100 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 HKR1P10072 659 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 EPORP19235 508 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 EDNRAP25101 427 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 THPOP40225 353 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 DUSP3P51452 185 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-205ENST00000493587 HMGA2P52926 109 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 SRSF5Q13243 272 aaKnown RBP6.18□□□□□ -1.42
VPS13B-205ENST00000493587 OR4A47Q6IF82 309 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 FRRS1Q6ZNA5 592 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 ABHD12BQ7Z5M8 362 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF429Q86V71 674 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 RNF175Q8N4F7 328 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 STPG4Q8N801 248 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 TMEM99Q8N816 258 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 DOCK8Q8NF50 2099 aa6.18□□□□□ -1.42
VPS13B-205ENST00000493587 ARID1BQ8NFD5 2236 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-205ENST00000493587 FBXO32Q969P5 355 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms