RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 V9GYQ6 96 aa10.46□□□□□ -0.73
COL6A1-205ENST00000492851 OR6C68A6NDL8 312 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 ARPC2O15144 300 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 MLNRO43193 412 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 GMDSO60547 372 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 GPANK1O95872 356 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 PRTN3P24158 256 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 GGT2P36268 569 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 ERFP50548 548 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 BLVRAP53004 296 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 BPIFB3P59826 476 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 UBA52P62987 128 aaKnown RBP10.45□□□□□ -0.74
COL6A1-205ENST00000492851 MXRA7P84157 204 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.45□□□□□ -0.74
COL6A1-205ENST00000492851 TRAP1Q12931 704 aaKnown RBP10.45□□□□□ -0.74
COL6A1-205ENST00000492851 GK2Q14410 553 aaPredicted RBP10.45□□□□□ -0.74
COL6A1-205ENST00000492851 RSPO1Q2MKA7 263 aaPredicted RBP10.45□□□□□ -0.74
COL6A1-205ENST00000492851 OTPQ5XKR4 325 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 DRAM2Q6UX65 266 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 ZNF620Q6ZNG0 422 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 MRPL21Q7Z2W9 205 aaKnown RBP10.45□□□□□ -0.74
COL6A1-205ENST00000492851 MOGAT3Q86VF5 341 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 KLBQ86Z14 1044 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 ZDHHC21Q8IVQ6 265 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 ARHGAP24Q8N264 748 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 SPERTQ8NA61 448 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 BHLHE23Q8NDY6 225 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 OR8B3Q8NGG8 313 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 ZNF420Q8TAQ5 688 aaPredicted RBP10.45□□□□□ -0.74
COL6A1-205ENST00000492851 Q8TCH9 128 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 RAB40AQ8WXH6 277 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 SLCO4A1Q96BD0 722 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 OR8B2Q96RD0 313 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 PLA2G12AQ9BZM1 189 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 OPA3Q9H6K4 179 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 IL20Q9NYY1 176 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 BAIAP2Q9UQB8 552 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 ARL2BPQ9Y2Y0 163 aa10.45□□□□□ -0.74
COL6A1-205ENST00000492851 NBEAL1Q6ZS30 2694 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 KIR2DS1A0A191URI9 304 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 F5H5P2 479 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 CLDN34H7C241 214 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 NDUFA2O43678 99 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 CYB5R3P00387 301 aaPredicted RBP10.44□□□□□ -0.74
COL6A1-205ENST00000492851 HKR1P10072 659 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 CD200P41217 278 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 NPY4RP50391 375 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 TUSC1Q2TAM9 212 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 ZNF404Q494X3 552 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 CD276Q5ZPR3 534 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 PGBD2Q6P3X8 592 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 CFAP77Q6ZQR2 320 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 DCDC5Q6ZRR9 648 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 LINC00346Q8IVM7 164 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 SIGLECL1Q8N7X8 197 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 SDR9C7Q8NEX9 313 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 PROKR2Q8NFJ6 384 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 C22orf15Q8WYQ4 148 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 SLC25A28Q96A46 364 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 TMEM246Q9BRR3 403 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 MUC13Q9H3R2 512 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 SP140LQ9H930 580 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 FN3KRPQ9HA64 309 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 CLN8Q9UBY8 286 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 CDH10Q9Y6N8 788 aa10.44□□□□□ -0.74
COL6A1-205ENST00000492851 IGHV2-70DA0A0C4DH43 119 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 H0YL77 283 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 M0R135 149 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 TNFRSF11BO00300 401 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 APOC1P02654 83 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 LIPFP07098 398 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 FMO3P31513 532 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 CD80P33681 288 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 SLC15A1P46059 708 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 PITPNBP48739 271 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 SEC61A1P61619 476 aaKnown RBP10.43□□□□□ -0.74
COL6A1-205ENST00000492851 BAMBIQ13145 260 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 MAB21L1Q13394 359 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 TAF13Q15543 124 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 OR8G1Q15617 311 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 C11orf91Q3C1V1 193 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 AWAT1Q58HT5 328 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 SLC35F1Q5T1Q4 408 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 RASSF6Q6ZTQ3 369 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 C9orf139Q6ZV77 190 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 DEFB107AQ8IZN7 70 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 UPRTQ96BW1 309 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 ZNF799Q96GE5 643 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 MAGIXQ9H6Y5 334 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 WDR76Q9H967 626 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 PNRC2Q9NPJ4 139 aaKnown RBP10.43□□□□□ -0.74
COL6A1-205ENST00000492851 ESM1Q9NQ30 184 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 MRPL22Q9NWU5 206 aaKnown RBP10.43□□□□□ -0.74
COL6A1-205ENST00000492851 MRPL15Q9P015 296 aaKnown RBP10.43□□□□□ -0.74
COL6A1-205ENST00000492851 ACTR3BQ9P1U1 418 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 KIF17Q9P2E2 1029 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 ZNF69Q9UC07 566 aa10.43□□□□□ -0.74
COL6A1-205ENST00000492851 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.42□□□□□ -0.74
COL6A1-205ENST00000492851 GGT3PA6NGU5 568 aa10.42□□□□□ -0.74
COL6A1-205ENST00000492851 CD300LBA8K4G0 201 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 773.1 ms