RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CHRFAM7AQ494W8 412 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 C1orf185Q5T7R7 199 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 Q5W150 140 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 ADNP2Q6IQ32 1131 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 SLC25A34Q6PIV7 304 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 HORMAD1Q86X24 394 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 TMEM256Q8N2U0 113 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 RNF182Q8N6D2 247 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 ZNF615Q8N8J6 731 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 OR52K2Q8NGK3 314 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 TBL1YQ9BQ87 522 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 SLIRPQ9GZT3 109 aaKnown RBP2.32□□□□□ -2.04
CLK1-213ENST00000492793 AUNIPQ9H7T9 357 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 PXMP2Q9NR77 195 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 PDP1Q9P0J1 537 aaPredicted RBP2.32□□□□□ -2.04
CLK1-213ENST00000492793 TSSC4Q9Y5U2 329 aaPredicted RBP2.32□□□□□ -2.04
CLK1-213ENST00000492793 SAR1BQ9Y6B6 198 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 BRWD3Q6RI45 1802 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 INSRP06213 1382 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 PALLDQ8WX93 1383 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 PLA2R1Q13018 1463 aa2.32□□□□□ -2.04
CLK1-213ENST00000492793 C2orf16Q68DN1 1984 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 IGLV2-18A0A075B6J9 118 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 IGHV1-69DA0A0B4J2H0 117 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 A0A0U1RQV1 116 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 C5orf63A6NC05 138 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 LRRIQ4A6NIV6 560 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 COLCA2A8K830 154 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 SERPINE3A8MV23 424 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 DNASE2O00115 360 aaPredicted RBP2.31□□□□□ -2.04
CLK1-213ENST00000492793 BPY2O14599 106 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 CCNKO75909 580 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 HLA-HP01893 362 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 HLA-DQB1P01920 261 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 CTSLP07711 333 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 FGF4P08620 206 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 POLR2MP0CAP2 368 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 TAS2R31P59538 309 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 CACNG7P62955 275 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 MOBPQ13875 183 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 NCF4Q15080 339 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 CLEC2AQ6UVW9 174 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 CBLN2Q8IUK8 224 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 CDKL3Q8IVW4 592 aaPredicted RBP2.31□□□□□ -2.04
CLK1-213ENST00000492793 KATNAL2Q8IYT4 538 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 ARRDC1Q8N5I2 433 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 COMMD1Q8N668 190 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 OR9A2Q8NGT5 310 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 OR52E5Q8NH55 327 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 LINC01560Q8TB33 94 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 AGR3Q8TD06 166 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 JSRP1Q96MG2 331 aaPredicted RBP2.31□□□□□ -2.04
CLK1-213ENST00000492793 RNF145Q96MT1 663 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 CDX2Q99626 313 aaPredicted RBP2.31□□□□□ -2.04
CLK1-213ENST00000492793 DOK1Q99704 481 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 UQCC2Q9BRT2 126 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 FGF23Q9GZV9 251 aaPredicted RBP2.31□□□□□ -2.04
CLK1-213ENST00000492793 NTN4Q9HB63 628 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 ZC4H2Q9NQZ6 224 aa2.31□□□□□ -2.04
CLK1-213ENST00000492793 RCL1Q9Y2P8 373 aaKnown RBP2.31□□□□□ -2.04
CLK1-213ENST00000492793 KCNE1BA0A087WTH5 132 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 A0A0J9YXV3 536 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 NME4O00746 187 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 NMT2O60551 498 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 RBBP9O75884 186 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 AQP8O94778 261 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 RCBTB2O95199 551 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 MPZL1O95297 269 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 CTRB1P17538 263 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 IL1RNP18510 177 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 RAB4AP20338 218 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 USF1P22415 310 aaPredicted RBP2.3□□□□□ -2.04
CLK1-213ENST00000492793 MYL9P24844 172 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 TNFSF9P41273 254 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 RPS5P46782 204 aaKnown RBP2.3□□□□□ -2.04
CLK1-213ENST00000492793 CXCL12P48061 93 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 ZNF121P58317 390 aaPredicted RBP2.3□□□□□ -2.04
CLK1-213ENST00000492793 CRADDP78560 199 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 PRR3P79522 188 aaKnown RBP2.3□□□□□ -2.04
CLK1-213ENST00000492793 ITIH4Q14624 930 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 WDR43Q15061 677 aaKnown RBP eCLIP2.3□□□□□ -2.04
CLK1-213ENST00000492793 LY6EQ16553 131 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 BEX5Q5H9J7 111 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 STUMQ69YW2 141 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 VKORC1L1Q8N0U8 176 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 PQLC3Q8N755 202 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 UBAC2Q8NBM4 344 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 C11orf72Q8NBR9 251 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 OR56A4Q8NGH8 313 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 OR6N1Q8NGY5 312 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 RAB1CQ92928 201 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 APH1AQ96BI3 265 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 HAUS1Q96CS2 278 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 RBBP8Q99708 897 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 RSG1Q9BU20 258 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 CALN1Q9BXU9 219 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 C1orf198Q9H425 327 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 CLSTN2Q9H4D0 955 aa2.3□□□□□ -2.04
CLK1-213ENST00000492793 MCUBQ9NWR8 336 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms