RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 CRYBB2P43320 205 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 AKR1D1P51857 326 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 SLC16A1P53985 500 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 SNRPGP62308 76 aaKnown RBP11.4□□□□□ -0.58
HDAC3-213ENST00000492506 HOXC5Q00444 222 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 CBFBQ13951 182 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 MLC1Q15049 377 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 FCN2Q15485 313 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 SPHARQ15513 63 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 GTDC1Q4AE62 458 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 SYT14P1Q58G82 188 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 TEX30Q5JUR7 227 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 DCST2Q5T1A1 773 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 ZNF730Q6ZMV8 503 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 CBLL1Q75N03 491 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 TMEM17Q86X19 198 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 BVESQ8NE79 360 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 OR8D4Q8NGM9 314 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 ASB13Q8WXK3 278 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 TSSK3Q96PN8 268 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 GHITMQ9H3K2 345 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 MYOZ1Q9NP98 299 aaPredicted RBP11.4□□□□□ -0.58
HDAC3-213ENST00000492506 SLC17A5Q9NRA2 495 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 POLE3Q9NRF9 147 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 GPATCH2Q9NW75 528 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 GIMAP2Q9UG22 337 aa11.4□□□□□ -0.58
HDAC3-213ENST00000492506 LSM2Q9Y333 95 aaKnown RBP11.4□□□□□ -0.58
HDAC3-213ENST00000492506 RPL36Q9Y3U8 105 aaKnown RBP11.4□□□□□ -0.58
HDAC3-213ENST00000492506 ST8SIA5O15466 376 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 TPST2O60704 377 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 CDRT1O95170 752 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 SULT1A3P0DMM9 295 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 SULT1A4P0DMN0 295 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 MAPK3P27361 379 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-213ENST00000492506 VEGFCP49767 419 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 CSNK2A1P68400 391 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-213ENST00000492506 HNRNPA0Q13151 305 aaKnown RBP11.39□□□□□ -0.59
HDAC3-213ENST00000492506 SKP2Q13309 424 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 ZMYND11Q15326 602 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 RFTN2Q52LD8 501 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-213ENST00000492506 PLA1AQ53H76 456 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 METTL11BQ5VVY1 283 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 C17orf78Q8N4C9 275 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 C1orf162Q8NEQ5 155 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-213ENST00000492506 SEMA6DQ8NFY4 1073 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 ST8SIA1Q92185 356 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 NSMAFQ92636 917 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 KCTD12Q96CX2 325 aaKnown RBP11.39□□□□□ -0.59
HDAC3-213ENST00000492506 ACTRT3Q9BYD9 372 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 BHLHE41Q9C0J9 482 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-213ENST00000492506 RNF167Q9H6Y7 350 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 AASSQ9UDR5 926 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 KCNE5Q9UJ90 142 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 MOKQ9UQ07 419 aa11.39□□□□□ -0.59
HDAC3-213ENST00000492506 CENPVL1A0A0U1RR11 272 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 SERINC4A6NH21 518 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 DNASE2O00115 360 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-213ENST00000492506 LILRA1O75019 489 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 MRPL33O75394 65 aaKnown RBP11.38□□□□□ -0.59
HDAC3-213ENST00000492506 ZNF682O95780 498 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 FABP1P07148 127 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 TACSTD2P09758 323 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 CLEC2LP0C7M8 214 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 G6PDP11413 515 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 CPEP16870 476 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 GIFP27352 417 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 FGF9P31371 208 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-213ENST00000492506 EVX1P49640 407 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 COMPP49747 757 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-213ENST00000492506 GDI2P50395 445 aaKnown RBP11.38□□□□□ -0.59
HDAC3-213ENST00000492506 CCR4P51679 360 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 LGALS3BPQ08380 585 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 OPCMLQ14982 345 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 SNAPC1Q16533 368 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 MICBQ29980 383 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 TUSC1Q2TAM9 212 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 C9orf135Q5VTT2 229 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 ZNF57Q68EA5 555 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-213ENST00000492506 UQCC3Q6UW78 93 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 BAIAP2L2Q6UXY1 529 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 PDZD9Q8IXQ8 264 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 ZNF614Q8N883 585 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 LAT2Q9GZY6 243 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 SLC7A10Q9NS82 523 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 ACER3Q9NUN7 267 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 AMDHD2Q9Y303 409 aa11.38□□□□□ -0.59
HDAC3-213ENST00000492506 TEX46H3BTG2 121 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 GPR171O14626 319 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 PDCD5O14737 125 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 SELENOFO60613 162 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 PMS2P2O95744 297 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 KDELR2P33947 212 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 SERPINF1P36955 418 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 H3F3AP84243 136 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 CAMK2DQ13557 499 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 LGALSLQ3ZCW2 172 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-213ENST00000492506 CNIH2Q6PI25 160 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 LSRQ86X29 649 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-213ENST00000492506 SKA3Q8IX90 412 aa11.37□□□□□ -0.59
HDAC3-213ENST00000492506 OR10G2Q8NGC3 310 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms