RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 UBA52P62987 128 aaKnown RBP7.71□□□□□ -1.18
HDAC3-212ENST00000492407 ERVK-25P63136 954 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 ELF3P78545 371 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-212ENST00000492407 TNFAIP6P98066 277 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-212ENST00000492407 GLO1Q04760 184 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 PRKCDQ05655 676 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 FMODQ06828 376 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 PSG7Q13046 419 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 TRAM2Q15035 370 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 CYBRD1Q53TN4 286 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 AWAT1Q58HT5 328 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 RABL3Q5HYI8 236 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 FAM209BQ5JX69 171 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 OAFQ86UD1 273 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 OFCC1Q8IZS5 231 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 MUC20Q8N307 709 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-212ENST00000492407 LRRC75AQ8NAA5 344 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 C10orf82Q8WW14 230 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 PTP4A1Q93096 173 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 TMIGD2Q96BF3 282 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 HAVCR1Q96D42 359 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 DCLRE1CQ96SD1 692 aaKnown RBP7.71□□□□□ -1.18
HDAC3-212ENST00000492407 SLC6A7Q99884 636 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 ANKRD19PQ9H560 264 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 NPHS2Q9NP85 383 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 POLE4Q9NR33 117 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 TMEM106BQ9NUM4 274 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 PLEK2Q9NYT0 353 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 PTTG2Q9NZH5 202 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 IL20RAQ9UHF4 553 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 PURGQ9UJV8 347 aaKnown RBP7.71□□□□□ -1.18
HDAC3-212ENST00000492407 A4GNTQ9UNA3 340 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 AUP1Q9Y679 476 aa7.71□□□□□ -1.18
HDAC3-212ENST00000492407 A0A0G2JND7 137 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 SMIM31A0A1B0GVY4 71 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 ISPDA4D126 451 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 F5H0A9 414 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-212ENST00000492407 TIMM8AO60220 97 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-212ENST00000492407 ABHD16AO95870 558 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 IFNW1P05000 195 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 IFI30P13284 250 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 ZFP36P26651 326 aaKnown RBP7.7□□□□□ -1.18
HDAC3-212ENST00000492407 OR1E2P47887 323 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 RAB4BP61018 213 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 LSM6P62312 80 aaKnown RBP7.7□□□□□ -1.18
HDAC3-212ENST00000492407 BTG1P62324 171 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 LCN2P80188 198 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 ZNF154Q13106 437 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 ENDOGQ14249 297 aaKnown RBP7.7□□□□□ -1.18
HDAC3-212ENST00000492407 TMEM255AQ5JRV8 349 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 SAPCD1Q5SSQ6 148 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 SPATA46Q5T0L3 261 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 ZNF774Q6NX45 483 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 C9orf139Q6ZV77 190 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 TMPRSS11FQ6ZWK6 438 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 NLRC3Q7RTR2 1065 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 GPR141Q7Z602 305 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 ARPINQ7Z6K5 226 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 ZNF454Q8N9F8 522 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 DEFB108BQ8NET1 73 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 OR2T12Q8NG77 320 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 ACOT11Q8WXI4 607 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-212ENST00000492407 GTF3AQ92664 365 aaKnown RBP7.7□□□□□ -1.18
HDAC3-212ENST00000492407 TRIM63Q969Q1 353 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 MRI1Q9BV20 369 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 FNDC11Q9BVV2 318 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 SPACA1Q9HBV2 294 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 ESM1Q9NQ30 184 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 GRHPRQ9UBQ7 328 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 LRCH1Q9Y2L9 728 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 INSIG2Q9Y5U4 225 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 MEGF8Q7Z7M0 2845 aa7.7□□□□□ -1.18
HDAC3-212ENST00000492407 ELOVL7A1L3X0 281 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 MAGEA13PA6NCF6 341 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 EFCAB9A8MZ26 197 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 XKRYO14609 159 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 MRASO14807 208 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 SGCEO43556 437 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 CD14P08571 375 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 SBK2P0C263 348 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 TNFRSF1BP20333 461 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 MDH2P40926 338 aaKnown RBP7.69□□□□□ -1.18
HDAC3-212ENST00000492407 MTNR1AP48039 350 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 HTD2P86397 168 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 PAX8Q06710 450 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 KLF10Q13118 480 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 TOP3AQ13472 1001 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-212ENST00000492407 AQP6Q13520 282 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 FHL1Q13642 323 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 KPNB1Q14974 876 aaKnown RBP7.69□□□□□ -1.18
HDAC3-212ENST00000492407 KCNMB1Q16558 191 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 ZNF181Q2M3W8 571 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 CNPY1Q3B7I2 92 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 ARMCX4Q5H9R4 360 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 LRRN1Q6UXK5 716 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 FBXW12Q6X9E4 464 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 MBOAT2Q6ZWT7 520 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 THNSL2Q86YJ6 484 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 NRMQ8IXM6 262 aa7.69□□□□□ -1.18
HDAC3-212ENST00000492407 MICU2Q8IYU8 434 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms