RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 PRRG3Q9BZD7 231 aa12.92□□□□□ -0.34
SS18L1-204ENST00000491916 YIPF3Q9GZM5 350 aa12.92□□□□□ -0.34
SS18L1-204ENST00000491916 HAO2Q9NYQ3 351 aa12.92□□□□□ -0.34
SS18L1-204ENST00000491916 ZNF319Q9P2F9 582 aa12.92□□□□□ -0.34
SS18L1-204ENST00000491916 SVEP1Q4LDE5 3571 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 RP2O75695 350 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 LCATP04180 440 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 MRPL3P09001 348 aaKnown RBP12.91□□□□□ -0.34
SS18L1-204ENST00000491916 SLC2A1P11166 492 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 GABRB1P18505 474 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 GIFP27352 417 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 PDLIM4P50479 330 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 ZNF81P51508 661 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 RPS7P62081 194 aaKnown RBP12.91□□□□□ -0.34
SS18L1-204ENST00000491916 CCL8P80075 99 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 GK2Q14410 553 aaPredicted RBP12.91□□□□□ -0.34
SS18L1-204ENST00000491916 RCN1Q15293 331 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 MOGQ16653 247 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 OR2T2Q6IF00 324 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 ZNF454Q8N9F8 522 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 OR8J1Q8NGP2 316 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 UBASH3BQ8TF42 649 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 SPTSSAQ969W0 71 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 EME1Q96AY2 570 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 ZNF582Q96NG8 517 aaPredicted RBP12.91□□□□□ -0.34
SS18L1-204ENST00000491916 ADGRL4Q9HBW9 690 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 MSL2Q9HCI7 577 aa12.91□□□□□ -0.34
SS18L1-204ENST00000491916 LOC390937A0A1W2PQ73 354 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 SMAD7O15105 426 aaKnown RBP12.9□□□□□ -0.34
SS18L1-204ENST00000491916 SPRY3O43610 288 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 LYNP07948 512 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 CSF3P09919 207 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 NR4A2P43354 598 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 RAD23AP54725 363 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 GRB2P62993 217 aaKnown RBP12.9□□□□□ -0.34
SS18L1-204ENST00000491916 ELF3P78545 371 aaPredicted RBP12.9□□□□□ -0.34
SS18L1-204ENST00000491916 MRPS11P82912 194 aaKnown RBP12.9□□□□□ -0.34
SS18L1-204ENST00000491916 ZNF92Q03936 586 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 HNRNPA0Q13151 305 aaKnown RBP12.9□□□□□ -0.34
SS18L1-204ENST00000491916 SLC25A30Q5SVS4 291 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 GLYATL3Q5SZD4 288 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 LPCAT4Q643R3 524 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 OR5L1Q8NGL2 311 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 THEM6Q8WUY1 208 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 STMN2Q93045 179 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 SPSB4Q96A44 273 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
SS18L1-204ENST00000491916 MYOZ1Q9NP98 299 aaPredicted RBP12.9□□□□□ -0.34
SS18L1-204ENST00000491916 AASSQ9UDR5 926 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 GPR160Q9UJ42 338 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 ABCA2Q9BZC7 2435 aa12.9□□□□□ -0.34
SS18L1-204ENST00000491916 SLC22A31A6NKX4 558 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 IQCF6A8MYZ5 107 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 NDUFS8O00217 210 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 TIMM8AO60220 97 aaPredicted RBP12.89□□□□□ -0.35
SS18L1-204ENST00000491916 LY6G6DO95868 133 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 CD55P08174 381 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 HTR1FP30939 366 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 RBMXP38159 391 aaKnown RBP12.89□□□□□ -0.35
SS18L1-204ENST00000491916 LIPAP38571 399 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 CX3CR1P49238 355 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 SNRPGP62308 76 aaKnown RBP12.89□□□□□ -0.35
SS18L1-204ENST00000491916 ROM1Q03395 351 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 TSTQ16762 297 aaKnown RBP12.89□□□□□ -0.35
SS18L1-204ENST00000491916 PCGF3Q3KNV8 242 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 FAM209AQ5JX71 171 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 LCN1P1Q5VSP4 162 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 LRRN1Q6UXK5 716 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 GID4Q8IVV7 300 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 OR5AS1Q8N127 324 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 OR2AE1Q8NHA4 323 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 FAM81AQ8TBF8 368 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 SNX33Q8WV41 574 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 TRUB1Q8WWH5 349 aaKnown RBP12.89□□□□□ -0.35
SS18L1-204ENST00000491916 RDH5Q92781 318 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 BPESC1Q9GZL8 116 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 CYSLTR2Q9NS75 346 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 FAM118AQ9NWS6 357 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 DNAJC27Q9NZQ0 273 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 NKX1-2Q9UD57 310 aaPredicted RBP12.89□□□□□ -0.35
SS18L1-204ENST00000491916 CGGBP1Q9UFW8 167 aaPredicted RBP12.89□□□□□ -0.35
SS18L1-204ENST00000491916 CACNG2Q9Y698 323 aa12.89□□□□□ -0.35
SS18L1-204ENST00000491916 FN1P02751 2386 aaKnown RBP12.88□□□□□ -0.35
SS18L1-204ENST00000491916 IGHV4-61A0A0C4DH41 118 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 H0YL77 283 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 CASQ2O14958 399 aaPredicted RBP12.88□□□□□ -0.35
SS18L1-204ENST00000491916 SLC16A6O15403 523 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 MLNRO43193 412 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 ENTPD6O75354 484 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 ERCC1P07992 297 aaPredicted RBP12.88□□□□□ -0.35
SS18L1-204ENST00000491916 SBK2P0C263 348 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 SLC25A16P16260 332 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 PEX2P28328 305 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 SLC15A1P46059 708 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 SLC6A9P48067 706 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 ZNF121P58317 390 aaPredicted RBP12.88□□□□□ -0.35
SS18L1-204ENST00000491916 CDC42P60953 191 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 LOXL1Q08397 574 aaPredicted RBP12.88□□□□□ -0.35
SS18L1-204ENST00000491916 USP51Q70EK9 711 aa12.88□□□□□ -0.35
SS18L1-204ENST00000491916 SSX6Q7RTT6 188 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms