RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 RAD52P43351 418 aa12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 MTNR1AP48039 350 aa12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 HSPA13P48723 471 aa12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 UCP2P55851 309 aa12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 RSPO1Q2MKA7 263 aaPredicted RBP12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 SPTSSAQ969W0 71 aa12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 C4orf45Q96LM5 186 aa12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 REPIN1Q9BWE0 567 aaKnown RBP12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 ELOVL3Q9HB03 270 aa12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 TUBG2Q9NRH3 451 aa12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 CLN6Q9NWW5 311 aa12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 EIF3KQ9UBQ5 218 aaKnown RBP12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 LAMP5Q9UJQ1 280 aa12.87□□□□□ -0.35
CDC42SE1-205ENST00000491825 PHYHO14832 338 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 WBP4O75554 376 aaKnown RBP12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 CLIC3O95833 236 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 ABHD16AO95870 558 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 MRPL3P09001 348 aaKnown RBP12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 GNAO1P09471 354 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 ACSM4P0C7M7 580 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 VHLP40337 213 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 OPRL1P41146 370 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 SLC15A1P46059 708 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 ISL1P61371 349 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 GRB2P62993 217 aaKnown RBP12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 IL5RAQ01344 420 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 ROM1Q03395 351 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 EFNB3Q15768 340 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 ADIPOQQ15848 244 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 TMEM154Q6P9G4 183 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 DEGS2Q6QHC5 323 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 IZUMO2Q6UXV1 221 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 COLCA1Q6ZS62 124 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 RFPL4BQ6ZWI9 263 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 C8orf59Q8N0T1 100 aaPredicted RBP12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 OR51G2Q8NGK0 314 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 FBLIM1Q8WUP2 373 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 ASB17Q8WXJ9 295 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 SLC7A6Q92536 515 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 COG8Q96MW5 612 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 AMELYQ99218 206 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 COPS4Q9BT78 406 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 KLHDC2Q9Y2U9 406 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 RTTNQ86VV8 2226 aa12.86□□□□□ -0.35
CDC42SE1-205ENST00000491825 VSTM5A8MXK1 200 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 J3QRE1 110 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 M0R135 149 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 NDUFS8O00217 210 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 DBHP09172 617 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 OR2T7P0C7T2 308 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 FAM157BP0CG42 384 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 DBTP11182 482 aaKnown RBP12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 THBS4P35443 961 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 SERPINF1P36955 418 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 EVX1P49640 407 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 PDLIM4P50479 330 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 TPTEP56180 551 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 SNRPD2P62316 118 aaKnown RBP12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 ACTC1P68032 377 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 ACTA1P68133 377 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 ZNF91Q05481 1191 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 CYB5R2Q6BCY4 276 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 KCTD18Q6PI47 426 aaPredicted RBP12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 DRAM2Q6UX65 266 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 SLC35F2Q8IXU6 374 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 OR2T27Q8NH04 317 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 MRPL24Q96A35 216 aaKnown RBP12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 APOBEC3DQ96AK3 386 aaPredicted RBP12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 RNFT2Q96EX2 444 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 ZNF799Q96GE5 643 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 KCNJ15Q99712 375 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 C1QTNF5Q9BXJ0 243 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 PLK3Q9H4B4 646 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 NIPAL2Q9H841 368 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 MRPS18AQ9NVS2 196 aaKnown RBP12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 CMAHPQ9Y471 501 aa12.85□□□□□ -0.35
CDC42SE1-205ENST00000491825 IGLV3-9A0A075B6K5 115 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 B9A039 149 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 PHF1O43189 567 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 APOC1P02654 83 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 OR4A8P0C604 315 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 ZNF250P15622 560 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 NR4A2P43354 598 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 PPP1CBP62140 327 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 EGR3Q06889 387 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 RAB40BQ12829 278 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 RGS7BPQ6MZT1 257 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 VHLLQ6RSH7 139 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 OR1J1Q8NGS3 322 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 ABHD4Q8TB40 342 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 THEM6Q8WUY1 208 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 TMEM158Q8WZ71 300 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 DOK1Q99704 481 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 ANKRD60Q9BZ19 345 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 RASSF4Q9H2L5 321 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 LPAR3Q9UBY5 353 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 AASSQ9UDR5 926 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 FBXO9Q9UK97 447 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 COPS3Q9UNS2 423 aa12.84□□□□□ -0.35
CDC42SE1-205ENST00000491825 EXOGQ9Y2C4 368 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms