RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 FAPQ12884 760 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 RTP5Q14D33 572 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 TMEM164Q5U3C3 297 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 FAM27BQ5VT28 67 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 RAB12Q6IQ22 244 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 CORO6Q6QEF8 472 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 CFAP77Q6ZQR2 320 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 PGAP1Q75T13 922 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 ADGRE4PQ86SQ3 457 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 BIVMQ86UB2 503 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 GPAT4Q86UL3 456 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 GGNQ86UU5 652 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 C20orf196Q8IYI0 205 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 FAM109AQ8N4B1 249 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 OR5D14Q8NGL3 314 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 ZFAND1Q8TCF1 268 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 ADAMTS17Q8TE56 1095 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 SLC39A7Q92504 469 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 NABP1Q96AH0 204 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 FYTTD1Q96QD9 318 aaKnown RBP9.49□□□□□ -0.89
USP4-214ENST00000491791 GON7Q9BXV9 100 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 OR51J1Q9H342 316 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 TP63Q9H3D4 680 aaPredicted RBP9.49□□□□□ -0.89
USP4-214ENST00000491791 NELFAQ9H3P2 528 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 TMEM185BQ9H7F4 350 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 METTL17Q9H7H0 456 aaPredicted RBP9.49□□□□□ -0.89
USP4-214ENST00000491791 TMEM138Q9NPI0 162 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 CENPMQ9NSP4 180 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 P4HTMQ9NXG6 502 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 DKKL1Q9UK85 242 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 RAB22AQ9UL26 194 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 SLC5A6Q9Y289 635 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 MRPS18BQ9Y676 258 aaKnown RBP9.49□□□□□ -0.89
USP4-214ENST00000491791 SETXQ7Z333 2677 aaKnown RBP9.49□□□□□ -0.89
USP4-214ENST00000491791 PCSK5Q92824 1860 aa9.49□□□□□ -0.89
USP4-214ENST00000491791 KALRNO60229 2985 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 A0A0U1RQV5 110 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 A0A1W2PNU3 283 aaPredicted RBP9.48□□□□□ -0.89
USP4-214ENST00000491791 A0A1W2PPL8 197 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 SNRPGP15A8MWD9 76 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 P2RY10O00398 339 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 ATXN7O15265 892 aaPredicted RBP9.48□□□□□ -0.89
USP4-214ENST00000491791 SYT7O43581 403 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 GMDSO60547 372 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 ICMTO60725 284 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 ATP6V1G1O75348 118 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 SNAPC5O75971 98 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 NDUFB6O95139 128 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 MT-CO3P00414 261 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 JMJD7P0C870 316 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 CPN1P15169 458 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 MSR1P21757 451 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 STOMP27105 288 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 BDKRB2P30411 391 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 PRSS3P35030 304 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 CYB561P49447 251 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 EFNB2P52799 333 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 FOXO1Q12778 655 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 PLA2G7Q13093 441 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 ENDOGQ14249 297 aaKnown RBP9.48□□□□□ -0.89
USP4-214ENST00000491791 FAM189A2Q15884 450 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 GLYATL3Q5SZD4 288 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 RIPPLY2Q5TAB7 128 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 RAET1LQ5VY80 246 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 OTPQ5XKR4 325 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 ABLIM2Q6H8Q1 611 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.48□□□□□ -0.89
USP4-214ENST00000491791 IZUMO1Q8IYV9 350 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 SLC22A24Q8N4F4 322 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 SPICQ8N5J4 248 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 CLEC1AQ8NC01 280 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 GJC3Q8NFK1 279 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 OR1M1Q8NGA1 313 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 SNIP1Q8TAD8 396 aaKnown RBP9.48□□□□□ -0.89
USP4-214ENST00000491791 SSC4DQ8WTU2 575 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 C10orf35Q96D05 121 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 HYLS1Q96M11 299 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 MED28Q9H204 178 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 SLA2Q9H6Q3 261 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 MYOZ1Q9NP98 299 aaPredicted RBP9.48□□□□□ -0.89
USP4-214ENST00000491791 ZFP64Q9NPA5 681 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 KLK11Q9UBX7 282 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 ALPK2Q86TB3 2170 aa9.48□□□□□ -0.89
USP4-214ENST00000491791 MEIKINA0A087WXM9 373 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 DHRS7CA6NNS2 312 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 ZNF716A6NP11 495 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.47□□□□□ -0.89
USP4-214ENST00000491791 NPIPA2E9PIF3 369 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 NPIPA3F8WFD2 350 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 SMAD9O15198 467 aaKnown RBP9.47□□□□□ -0.89
USP4-214ENST00000491791 DHHO43323 396 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 MT-ND4P03905 459 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 HPNP05981 417 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 TMIGD3P0DMS9 266 aaPredicted RBP9.47□□□□□ -0.89
USP4-214ENST00000491791 KLK2P20151 261 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 ENPP1P22413 925 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 MPZP25189 248 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 OTX2P32243 289 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 ALDH3B1P43353 468 aa9.47□□□□□ -0.89
USP4-214ENST00000491791 CCR6P51684 374 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms