RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	OR10A2	Q9H208	303 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	OR10A4	Q9H209	315 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	APMAP	Q9HDC9	416 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	5.64	□□□□□ -1.51
FN1-223	ENST00000490833	FAM206A	Q9NX38	181 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	NKIRAS2	Q9NYR9	191 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	MGAT4C	Q9UBM8	478 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	B4GALT7	Q9UBV7	327 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	SHPK	Q9UHJ6	478 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	VDAC3	Q9Y277	283 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	SLCO1B1	Q9Y6L6	691 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	CHD9	Q3L8U1	2897 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	ADAMTS9	Q9P2N4	1935 aa		5.64	□□□□□ -1.51
FN1-223	ENST00000490833	TRAV8-7	A0A075B6U6	113 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	TMEM272	A0A1B0GTI8	110 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	CIB4	A0PJX0	185 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	TMEM82	A0PJX8	343 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	ANKRD34B	A5PLL1	514 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	C21orf140	B9A014	251 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	KRBOX1	C9JBD0	128 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833		H7C1C5	153 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	PSMD9	O00233	223 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	KDM4B	O94953	1096 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	OR2F2	O95006	317 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	FARS2	O95363	451 aa	Known RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	HP	P00738	406 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	CFI	P05156	583 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	QDPR	P09417	244 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	ACSM4	P0C7M7	580 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	RPA2	P15927	270 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	PPP3CB	P16298	524 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	ZNF28	P17035	718 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	CSRP1	P21291	193 aa	Known RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	PMEL	P40967	661 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	HTR2B	P41595	481 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	CX3CR1	P49238	355 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	VEGFC	P49767	419 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	ZNF81	P51508	661 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	MLF1	P58340	268 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	SEC61A1	P61619	476 aa	Known RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	LCN6	P62502	163 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	MRPS34	P82930	218 aa	Known RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	SRSF4	Q08170	494 aa	Known RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	SIGLEC14	Q08ET2	396 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	PMPCA	Q10713	525 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	OR2F1	Q13607	317 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	ZNF345	Q14585	488 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	TMEM176B	Q3YBM2	270 aa	Predicted RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	GXYLT1	Q4G148	440 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	VAX1	Q5SQQ9	334 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	ZNF468	Q5VIY5	522 aa	Predicted RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	FAM27B	Q5VT28	67 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	C1QL3	Q5VWW1	255 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	DRAM2	Q6UX65	266 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	SEZ6L2	Q6UXD5	910 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	C3P1	Q6ZMU1	363 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	IDO2	Q6ZQW0	420 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833		Q6ZSR3	168 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	FOXL2NB	Q6ZUU3	175 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	PEG10	Q86TG7	708 aa	Known RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	GPAT4	Q86UL3	456 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	SLC51B	Q86UW2	128 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	NAA40	Q86UY6	237 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	MAML2	Q8IZL2	1156 aa	Predicted RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	OR8H3	Q8N146	312 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	FTMT	Q8N4E7	242 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	C12orf45	Q8N5I9	185 aa	Predicted RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	PLPP7	Q8NBV4	271 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	OR2AK2	Q8NG84	335 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	OR11H7	Q8NGC8	314 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	OR10R2	Q8NGX6	335 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	CPT1C	Q8TCG5	803 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	AQP3	Q92482	292 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	CPNE4	Q96A23	557 aa	Predicted RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	FGGY	Q96C11	551 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	ARL5B	Q96KC2	179 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	TAAR9	Q96RI9	348 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	GFI1	Q99684	422 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	EDEM2	Q9BV94	578 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	ULBP3	Q9BZM4	244 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	OR11A1	Q9GZK7	315 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	CHST6	Q9GZX3	395 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	OPA3	Q9H6K4	179 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	SEC61A2	Q9H9S3	476 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	ZFP64	Q9NPA5	681 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	SLC39A1	Q9NY26	324 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	PFDN2	Q9UHV9	154 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	DKKL1	Q9UK85	242 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	FBXL2	Q9UKC9	423 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	BOK	Q9UMX3	212 aa	Predicted RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	KLHDC2	Q9Y2U9	406 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	MEMO1	Q9Y316	297 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	PTRH2	Q9Y3E5	179 aa	Known RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	5.63	□□□□□ -1.51
FN1-223	ENST00000490833	THADA	Q6YHU6	1953 aa		5.63	□□□□□ -1.51
FN1-223	ENST00000490833	HEATR5A	Q86XA9	2040 aa		5.62	□□□□□ -1.51
FN1-223	ENST00000490833	SCN2A	Q99250	2005 aa		5.62	□□□□□ -1.51
FN1-223	ENST00000490833	TDRD6	O60522	2096 aa	Known RBP	5.62	□□□□□ -1.51
FN1-223	ENST00000490833	SEC16A	O15027	2179 aa		5.62	□□□□□ -1.51

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