RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 CHIAQ9BZP6 476 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 TMEM100Q9NV29 134 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 RPS6KA6Q9UK32 745 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 TMCC3Q9ULS5 477 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 TMEM5Q9Y2B1 443 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 CAPN7Q9Y6W3 813 aa12.91□□□□□ -0.34
COL2A1-207ENST00000490609 FAM20BO75063 409 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 PTBP3O95758 552 aaKnown RBP12.9□□□□□ -0.34
COL2A1-207ENST00000490609 H1F0P07305 194 aaKnown RBP12.9□□□□□ -0.34
COL2A1-207ENST00000490609 COX4I1P13073 169 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 FPR3P25089 353 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 CD200P41217 278 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 FKBP9P1Q75LS8 142 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 ADCK1Q86TW2 530 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 ZBTB46Q86UZ6 589 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 LINC00346Q8IVM7 164 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 RP9Q8TA86 221 aaKnown RBP12.9□□□□□ -0.34
COL2A1-207ENST00000490609 ZNRF4Q8WWF5 429 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 DDOQ99489 341 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 CITED1Q99966 193 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 HDHD2Q9H0R4 259 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 MARCH7Q9H992 704 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 SMURF1Q9HCE7 757 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 SRA1Q9HD15 236 aaKnown RBP12.9□□□□□ -0.34
COL2A1-207ENST00000490609 MRPL22Q9NWU5 206 aaKnown RBP12.9□□□□□ -0.34
COL2A1-207ENST00000490609 CYB5R1Q9UHQ9 305 aa12.9□□□□□ -0.34
COL2A1-207ENST00000490609 CENPVL3A0A0U1RRI6 287 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 OR6C68A6NDL8 312 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 UNC119BA6NIH7 251 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 SEMG1P04279 462 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 MELTFP08582 738 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 MDH1P40925 334 aaKnown RBP12.89□□□□□ -0.35
COL2A1-207ENST00000490609 DCDC5Q6ZRR9 648 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 CELF2-AS1Q8N7Q2 184 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 OR8B3Q8NGG8 313 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 SLCO4A1Q96BD0 722 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 MAP6Q96JE9 813 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 OR8B2Q96RD0 313 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 NMNAT3Q96T66 252 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 RASSF4Q9H2L5 321 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 TNFRSF19Q9NS68 423 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 UFSP2Q9NUQ7 469 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 MRGBPQ9NV56 204 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 ABCD2Q9UBJ2 740 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 CLN8Q9UBY8 286 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 AP3M1Q9Y2T2 418 aa12.89□□□□□ -0.35
COL2A1-207ENST00000490609 F5H5K5 113 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 PHYHO14832 338 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 SLC22A2O15244 555 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 TROVE2P10155 538 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL2A1-207ENST00000490609 HIST1H1CP16403 213 aaKnown RBP12.88□□□□□ -0.35
COL2A1-207ENST00000490609 RHCEP18577 417 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 CFHR2P36980 270 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 RFX4Q33E94 735 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 SNAI3Q3KNW1 292 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 MIDNQ504T8 468 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 SMARCD3Q6STE5 483 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 FIP1L1Q6UN15 594 aaKnown RBP12.88□□□□□ -0.35
COL2A1-207ENST00000490609 FGFRL1Q8N441 504 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 OR52J3Q8NH60 311 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 PLEKHA8Q96JA3 519 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 ERMAPQ96PL5 475 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-207ENST00000490609 HOPXQ9BPY8 73 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-207ENST00000490609 FN3KQ9H479 309 aa12.88□□□□□ -0.35
COL2A1-207ENST00000490609 ZNF879B4DU55 563 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 ARPC3O15145 178 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 NDUFA7O95182 113 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 CRABP1P29762 137 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 RPS27P42677 84 aaKnown RBP12.87□□□□□ -0.35
COL2A1-207ENST00000490609 RPS6KA3P51812 740 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 RAG2P55895 527 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 ELF3P78545 371 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-207ENST00000490609 ZNF92Q03936 586 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 TRAP1Q12931 704 aaKnown RBP12.87□□□□□ -0.35
COL2A1-207ENST00000490609 ZNF362Q5T0B9 420 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-207ENST00000490609 SFRP4Q6FHJ7 346 aaPredicted RBP12.87□□□□□ -0.35
COL2A1-207ENST00000490609 RRM2BQ7LG56 351 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 ARPINQ7Z6K5 226 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 OR4K13Q8NH42 304 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 SIRPDQ9H106 197 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 NOX4Q9NPH5 578 aa12.87□□□□□ -0.35
COL2A1-207ENST00000490609 DCAF13Q9NV06 445 aaKnown RBP12.87□□□□□ -0.35
COL2A1-207ENST00000490609 LRRC30A6NM36 301 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 GSTA4O15217 222 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 LHBP01229 141 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 CA6P23280 308 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 OTX1P32242 354 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-207ENST00000490609 CENPAP49450 140 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 FGD3Q5JSP0 725 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 OLFML2AQ68BL7 652 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 ASPHD2Q6ICH7 369 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 LYPD4Q6UWN0 246 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 HACD2Q6Y1H2 254 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 ZNF826PQ6ZT77 177 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 NLRC3Q7RTR2 1065 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 C11orf53Q8IXP5 236 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 C1orf87Q8N0U7 546 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 ERGIC1Q969X5 290 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 ATF6BQ99941 703 aa12.86□□□□□ -0.35
COL2A1-207ENST00000490609 PCGF1Q9BSM1 259 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms