RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ZDHHC21Q8IVQ6 265 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 OR52E2Q8NGJ4 325 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 MCUR1Q96AQ8 359 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 PITX2Q99697 317 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 ATF6BQ99941 703 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 BTBD10Q9BSF8 475 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 NTN4Q9HB63 628 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 TMEM100Q9NV29 134 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 TAGLN3Q9UI15 199 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 LRCH1Q9Y2L9 728 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 PPIAL4AQ9Y536 164 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 LYVE1Q9Y5Y7 322 aa16.24■□□□□ 0.19
TNFRSF1B-202ENST00000489921 C5orf63A6NC05 138 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 EGR1P18146 543 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 NOS3P29474 1203 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 GATA4P43694 442 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 GYS2P54840 703 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 HOXA4Q00056 320 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 ECH1Q13011 328 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 ZNF404Q494X3 552 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 SLC36A3Q495N2 470 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 ESCO2Q56NI9 601 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 LYPD4Q6UWN0 246 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 CPLX4Q7Z7G2 160 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 KLBQ86Z14 1044 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 OR9Q2Q8NGE9 314 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 OR8D4Q8NGM9 314 aa16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 SOX21Q9Y651 276 aaPredicted RBP16.23■□□□□ 0.19
TNFRSF1B-202ENST00000489921 CPT2P23786 658 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 PYCR1P32322 319 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 IFNGR2P38484 337 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 RPS27P42677 84 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 RAD23AP54725 363 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 AWAT1Q58HT5 328 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 ARMCX4Q5H9R4 360 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 CLEC12AQ5QGZ9 265 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 DEFB107AQ8IZN7 70 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 CYB561A3Q8NBI2 242 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 OR4C15Q8NGM1 316 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 SLCO4A1Q96BD0 722 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 CDADC1Q9BWV3 514 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 SSBP3Q9BWW4 388 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 HCAR1Q9BXC0 346 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 IL20Q9NYY1 176 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 TMCC3Q9ULS5 477 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 MGAM2Q2M2H8 2515 aa16.22■□□□□ 0.19
TNFRSF1B-202ENST00000489921 GASTP01350 101 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 LCATP04180 440 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 IGHV4-38-2P0DP08 117 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 OTX1P32242 354 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 CD200P41217 278 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 MAGEA2P43356 314 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 MPPED2Q15777 294 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 SNAI3Q3KNW1 292 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 LYPD2Q6UXB3 125 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 ZNF841Q6ZN19 808 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 CELF2-AS1Q8N7Q2 184 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 C3orf56Q8N813 242 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 OR2AJ1Q8NGZ0 328 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 Q8TCH9 128 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 MRI1Q9BV20 369 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 NSRP1Q9H0G5 558 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 DDX28Q9NUL7 540 aaKnown RBP16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 MIOXQ9UGB7 285 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 OR5V1Q9UGF6 321 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 KCNG2Q9UJ96 466 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 CDH10Q9Y6N8 788 aa16.21■□□□□ 0.19
TNFRSF1B-202ENST00000489921 IGHV2-70DA0A0C4DH43 119 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 TCRBV5S2A0A599 114 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 TVP23AA6NH52 213 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 M0R135 149 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 KRT36O76013 467 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 HLA-DQA2P01906 255 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PPIAL4GP0DN37 164 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 RPS2P15880 293 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 ATP6V1B2P21281 511 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 SPATS1Q496A3 300 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 CYP2R1Q6VVX0 501 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PGAP1Q75T13 922 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 NEIL1Q96FI4 390 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 ZNF799Q96GE5 643 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 DUX5Q96PT3 197 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 TRIM15Q9C019 465 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 ARL2BPQ9Y2Y0 163 aa16.2■□□□□ 0.18
TNFRSF1B-202ENST00000489921 DNAJC9-AS1A6NH13 148 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PLATP00750 562 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 HKR1P10072 659 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PRTN3P24158 256 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 TPTEP56180 551 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 ZNF92Q03936 586 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PPP1R8Q12972 351 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PCK2Q16822 640 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 PRAMEF6Q5VXH4 476 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 RASSF6Q6ZTQ3 369 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 C9orf139Q6ZV77 190 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 SLC37A3Q8NCC5 494 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 C19orf18Q8NEA5 215 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 OR51L1Q8NGJ5 315 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 RAB40AQ8WXH6 277 aa16.19■□□□□ 0.18
TNFRSF1B-202ENST00000489921 UPRTQ96BW1 309 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms