RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 KIR3DL2P43630 455 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 MAP2K4P45985 399 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 TGM4P49221 684 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 NR1H2P55055 460 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 TPTEP56180 551 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 WNT4P56705 351 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 NANOS3P60323 173 aaKnown RBP9.4□□□□□ -0.9
TFF3-203ENST00000489676 ACSM1Q08AH1 577 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 TAF13Q15543 124 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 MSMPQ1L6U9 139 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 ZNF829Q3KNS6 432 aaPredicted RBP9.4□□□□□ -0.9
TFF3-203ENST00000489676 SNAI3Q3KNW1 292 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 ADAM5Q6NVV9 412 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 FAM220AQ7Z4H9 259 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 NAA40Q86UY6 237 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 CATSPERDQ86XM0 798 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 ZNF283Q8N7M2 679 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 YIPF7Q8N8F6 280 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 NUP37Q8NFH4 326 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 KBTBD8Q8NFY9 601 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 C4orf45Q96LM5 186 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 OR5M11Q96RB7 305 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 MYCBPQ99417 103 aaPredicted RBP9.4□□□□□ -0.9
TFF3-203ENST00000489676 MND1Q9BWT6 205 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 MOB1AQ9H8S9 216 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 G6PC2Q9NQR9 355 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 TBCCD1Q9NVR7 557 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 ZNF319Q9P2F9 582 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 NUFIP1Q9UHK0 495 aaKnown RBP9.4□□□□□ -0.9
TFF3-203ENST00000489676 ST6GALNAC2Q9UJ37 374 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 GRIP1Q9Y3R0 1128 aa9.4□□□□□ -0.9
TFF3-203ENST00000489676 ABCA12Q86UK0 2595 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 ACOD1A6NK06 481 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 LOC110117498-PIK3R3F6TDL0 507 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 CASKO14936 926 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 GPRIN2O60269 458 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 PLAUP00749 431 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 IGLV3-1P01715 115 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 APOC1P02654 83 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 LCKP06239 509 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 TACSTD2P09758 323 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 CCNOP22674 350 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 NR4A1P22736 598 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 PSMB10P40306 273 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 SLC6A9P48067 706 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 RGS6P49758 472 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 UCP2P55851 309 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 ERVS71-1P61550 626 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 EMX1Q04741 257 aaPredicted RBP9.39□□□□□ -0.91
TFF3-203ENST00000489676 MRPL28Q13084 256 aaKnown RBP9.39□□□□□ -0.91
TFF3-203ENST00000489676 SNTB2Q13425 540 aaKnown RBP9.39□□□□□ -0.91
TFF3-203ENST00000489676 TMEM255AQ5JRV8 349 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 WDR38Q5JTN6 314 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 UBE2UQ5VVX9 321 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 TMPRSS11AQ6ZMR5 421 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.39□□□□□ -0.91
TFF3-203ENST00000489676 PRSS35Q8N3Z0 413 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 OR8B12Q8NGG6 310 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 OR2G2Q8NGZ5 317 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 LILRB1Q8NHL6 650 aaPredicted RBP9.39□□□□□ -0.91
TFF3-203ENST00000489676 HAVCR2Q8TDQ0 301 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 TMEM171Q8WVE6 324 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 APOBEC3DQ96AK3 386 aaPredicted RBP9.39□□□□□ -0.91
TFF3-203ENST00000489676 PIK3IP1Q96FE7 263 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 CCDC90BQ9GZT6 254 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 POFUT1Q9H488 388 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 ACOT13Q9NPJ3 140 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 CHCHD3Q9NX63 227 aaKnown RBP9.39□□□□□ -0.91
TFF3-203ENST00000489676 PLEKHB1Q9UF11 243 aaPredicted RBP9.39□□□□□ -0.91
TFF3-203ENST00000489676 ERGIC3Q9Y282 383 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 RNF115Q9Y4L5 304 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 CACNA1DQ01668 2161 aa9.39□□□□□ -0.91
TFF3-203ENST00000489676 APCP25054 2843 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 A0A0U1RQV5 110 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 TMEM269A0A1B0GVZ9 245 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 OR4C45A6NMZ5 311 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 RPP14O95059 124 aaKnown RBP9.38□□□□□ -0.91
TFF3-203ENST00000489676 TTRP02766 147 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 ANXA2P07355 339 aaKnown RBP9.38□□□□□ -0.91
TFF3-203ENST00000489676 CD3EP07766 207 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 FAM157BP0CG42 384 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 COL8A1P27658 744 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 GTF2A1P52655 376 aaPredicted RBP9.38□□□□□ -0.91
TFF3-203ENST00000489676 PPP1CBP62140 327 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 BDH1Q02338 343 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 CDK5R1Q15078 307 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 SPHARQ15513 63 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 GLYATL3Q5SZD4 288 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 SP5Q6BEB4 398 aaPredicted RBP9.38□□□□□ -0.91
TFF3-203ENST00000489676 SLC22A25Q6T423 547 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 FAM57BQ71RH2 274 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 ZNF367Q7RTV3 350 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 KLBQ86Z14 1044 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 ZNF295-AS1Q8N0V1 137 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 PIAS4Q8N2W9 510 aaPredicted RBP9.38□□□□□ -0.91
TFF3-203ENST00000489676 SVOPQ8N4V2 548 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 TSPAN14Q8NG11 270 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 ABHD4Q8TB40 342 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 GATAD2BQ8WXI9 593 aa9.38□□□□□ -0.91
TFF3-203ENST00000489676 NEUROG1Q92886 237 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms