RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 RGS11O94810 467 aa15.97■□□□□ 0.15
NPHP4-209ENST00000489180 NDUFB7P17568 137 aa15.97■□□□□ 0.15
NPHP4-209ENST00000489180 LRFN5Q96NI6 719 aa15.97■□□□□ 0.15
NPHP4-209ENST00000489180 TIMM10BQ9Y5J6 103 aa15.97■□□□□ 0.15
NPHP4-209ENST00000489180 PHIPQ8WWQ0 1821 aa15.97■□□□□ 0.15
NPHP4-209ENST00000489180 LRP5LA4QPB2 252 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 RPUSD3Q6P087 351 aaKnown RBP15.96■□□□□ 0.15
NPHP4-209ENST00000489180 LURAP1Q96LR2 239 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 OR6C68A6NDL8 312 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 PTHLHP12272 177 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 PTCRAQ6ISU1 281 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-209ENST00000489180 ELSPBP1Q96BH3 223 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 FBXO4Q9UKT5 387 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 NRASP01111 189 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 OR5M8Q8NGP6 311 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 RPUSD4Q96CM3 377 aaKnown RBP15.96■□□□□ 0.15
NPHP4-209ENST00000489180 BTF3L4Q96K17 158 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 HYAL3O43820 417 aaPredicted RBP15.96■□□□□ 0.15
NPHP4-209ENST00000489180 RBPJQ06330 500 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 TMEM178AQ8NBL3 297 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 OR2AE1Q8NHA4 323 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 PPP1R1CQ8WVI7 109 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 SHARPINQ9H0F6 387 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 GHRLQ9UBU3 117 aa15.96■□□□□ 0.15
NPHP4-209ENST00000489180 TRIM77I1YAP6 450 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 XRCC2O43543 280 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 RRADP55042 308 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 DUSP2Q05923 314 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 GPNMBQ14956 572 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 XAF1Q6GPH4 301 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 LYG2Q86SG7 212 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 CCDC190Q86UF4 302 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 FAM185AQ8N0U4 392 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 OR4S1Q8NGB4 309 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 OR2A1Q8NGT9 310 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 MOB1AQ9H8S9 216 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 A4GNTQ9UNA3 340 aa15.96■□□□□ 0.14
NPHP4-209ENST00000489180 GON4LQ3T8J9 2241 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 FZD6O60353 706 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 TPOP07202 933 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 CCR2P41597 374 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 AKR1C3P42330 323 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 OR2G2Q8NGZ5 317 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 OR52N5Q8NH56 324 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 RXFP4Q8TDU9 374 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 ZNF576Q9H609 170 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 H7BYZ3 331 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 GLAP06280 429 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 PRPH2P23942 346 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 GNB1P62873 340 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 ANKRD16Q6P6B7 361 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 CALHM3Q86XJ0 350 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 TXNIPQ9H3M7 391 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 PKD1L3Q7Z443 1732 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 TNFSF11O14788 317 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 SEMG1P04279 462 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 LHFPL2Q6ZUX7 228 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 ZNF385DQ9H6B1 395 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 NGBQ9NPG2 151 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 KCNIP2Q9NS61 270 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 WNT11O96014 354 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 CDAP32320 146 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 PCBP3P57721 371 aaKnown RBP15.95■□□□□ 0.14
NPHP4-209ENST00000489180 Q6ZNB5 142 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 CAMKMTQ7Z624 323 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 GNB4Q9HAV0 340 aa15.95■□□□□ 0.14
NPHP4-209ENST00000489180 A0A0A6YYD5 115 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 SNRPGP15A8MWD9 76 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 PYCARD-AS1I3L0S3 204 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 GFERP55789 205 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 CRLF2Q9HC73 371 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 KCND3Q9UK17 655 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 METAP1P53582 386 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 PIGPP57054 158 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 DBX2Q6ZNG2 339 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 AKAP11Q9UKA4 1901 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 ZNF727A8MUV8 499 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 BAP18Q8IXM2 172 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 IFI44Q8TCB0 444 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 SLIRPQ9GZT3 109 aaKnown RBP15.94■□□□□ 0.14
NPHP4-209ENST00000489180 ZNF331Q9NQX6 463 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-209ENST00000489180 SPRY1O43609 319 aaPredicted RBP15.94■□□□□ 0.14
NPHP4-209ENST00000489180 CNIH1O95406 144 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 OR5H8P0DN80 308 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 FOXQ1Q9C009 403 aa15.94■□□□□ 0.14
NPHP4-209ENST00000489180 CLEC3BP05452 202 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 CEACAM5P06731 702 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 TEX261Q6UWH6 196 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 RIMS4Q9H426 269 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-209ENST00000489180 U3KQ87 197 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 FAM157BP0CG42 384 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 ZNF121P58317 390 aaPredicted RBP15.93■□□□□ 0.14
NPHP4-209ENST00000489180 RAE1P78406 368 aaKnown RBP15.93■□□□□ 0.14
NPHP4-209ENST00000489180 OR5AP2Q8NGF4 316 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 ANKRD36CQ5JPF3 1778 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 NUDT19A8MXV4 375 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 CYTIPO60759 359 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 RFC3P40938 356 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 ZNF90Q03938 601 aa15.93■□□□□ 0.14
NPHP4-209ENST00000489180 SKA3Q8IX90 412 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms