RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 GATA4P43694 442 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 MALLQ13021 153 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 MAB21L1Q13394 359 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 GK2Q14410 553 aaPredicted RBP12.8□□□□□ -0.36
TRIM50-203ENST00000488217 ZNF404Q494X3 552 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 FAM201AQ5SY85 155 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 SLC18B1Q6NT16 456 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 C9orf139Q6ZV77 190 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 ZBTB46Q86UZ6 589 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 JAZF1Q86VZ6 243 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 FAM86B1Q8N7N1 296 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 OR4K13Q8NH42 304 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 ERGIC1Q969X5 290 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 SLCO4A1Q96BD0 722 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 ADA2Q9NZK5 511 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 CYB5R1Q9UHQ9 305 aa12.8□□□□□ -0.36
TRIM50-203ENST00000488217 IDH3BO43837 385 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 GADD45GO95257 159 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 FAM107AO95990 144 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 LCATP04180 440 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 GGT2P36268 569 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 IL13RA1P78552 427 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 DBPQ10586 325 aaPredicted RBP12.79□□□□□ -0.36
TRIM50-203ENST00000488217 C16orf87Q6PH81 154 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 NLRC3Q7RTR2 1065 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 LINC00346Q8IVM7 164 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 PARP8Q8N3A8 854 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 CELF2-AS1Q8N7Q2 184 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 OR8B3Q8NGG8 313 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 SPRYD4Q8WW59 207 aaPredicted RBP12.79□□□□□ -0.36
TRIM50-203ENST00000488217 DACT3Q96B18 629 aaPredicted RBP12.79□□□□□ -0.36
TRIM50-203ENST00000488217 OR8B2Q96RD0 313 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 IFT27Q9BW83 186 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 OR52D1Q9H346 318 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 UNKLQ9H9P5 680 aaKnown RBP12.79□□□□□ -0.36
TRIM50-203ENST00000488217 SPAG4Q9NPE6 437 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 RPRD1BQ9NQG5 326 aaKnown RBP12.79□□□□□ -0.36
TRIM50-203ENST00000488217 WNK2Q9Y3S1 2297 aa12.79□□□□□ -0.36
TRIM50-203ENST00000488217 OR6C68A6NDL8 312 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 PLATP00750 562 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 HLA-DQA2P01906 255 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 NOS3P29474 1203 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 IFNGR2P38484 337 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 PITPNBP48739 271 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 TPTEP56180 551 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 TRAP1Q12931 704 aaKnown RBP12.78□□□□□ -0.36
TRIM50-203ENST00000488217 LYPD2Q6UXB3 125 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 CFAP77Q6ZQR2 320 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 DCDC5Q6ZRR9 648 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 PGAP1Q75T13 922 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 RNF148Q8N7C7 305 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 OR11L1Q8NGX0 322 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 Q8TCH9 128 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 ATF6BQ99941 703 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 NUDT16L1Q9BRJ7 211 aaKnown RBP12.78□□□□□ -0.36
TRIM50-203ENST00000488217 MYLK2Q9H1R3 596 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 CLN8Q9UBY8 286 aa12.78□□□□□ -0.36
TRIM50-203ENST00000488217 DYSFO75923 2080 aa12.77□□□□□ -0.36
TRIM50-203ENST00000488217 OR10H3O60404 316 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 ZNF823P16415 610 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 PSMB10P40306 273 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 CD200P41217 278 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 PRSS12P56730 875 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 BPIFB3P59826 476 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 WDR25Q64LD2 544 aaPredicted RBP12.77□□□□□ -0.37
TRIM50-203ENST00000488217 ZNF841Q6ZN19 808 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 FITM2Q8N6M3 262 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 OR10S1Q8NGN2 331 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 FANK1Q8TC84 345 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 MCUR1Q96AQ8 359 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 SLC22A4Q9H015 551 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 PRDM13Q9H4Q3 707 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 PNRC2Q9NPJ4 139 aaKnown RBP12.77□□□□□ -0.37
TRIM50-203ENST00000488217 TMCC3Q9ULS5 477 aa12.77□□□□□ -0.37
TRIM50-203ENST00000488217 CD300LBA8K4G0 201 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 FAM20BO75063 409 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 SEMG1P04279 462 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 CA6P23280 308 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 PRDX6P30041 224 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 SPIBQ01892 262 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 MPPED2Q15777 294 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 CLEC12AQ5QGZ9 265 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 SLC35F1Q5T1Q4 408 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 CD276Q5ZPR3 534 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 PLPP7Q8NBV4 271 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 GNPDA2Q8TDQ7 276 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 TAF15Q92804 592 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRIM50-203ENST00000488217 SPTSSAQ969W0 71 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 ZDHHC16Q969W1 377 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 TMIGD2Q96BF3 282 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 MAP6Q96JE9 813 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 DDOQ99489 341 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 SLITRK2Q9H156 845 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 UFSP2Q9NUQ7 469 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 MRPL22Q9NWU5 206 aaKnown RBP12.76□□□□□ -0.37
TRIM50-203ENST00000488217 RNF7Q9UBF6 113 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 KCNG2Q9UJ96 466 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 ARL2BPQ9Y2Y0 163 aa12.76□□□□□ -0.37
TRIM50-203ENST00000488217 NOP16Q9Y3C1 178 aaKnown RBP12.76□□□□□ -0.37
TRIM50-203ENST00000488217 V9GYQ6 96 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms