RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 TMEM100Q9NV29 134 aa16.22■□□□□ 0.19
CD55-209ENST00000488171 INSIG2Q9Y5U4 225 aa16.22■□□□□ 0.19
CD55-209ENST00000488171 B2RBV5 119 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 ZNF205O95201 554 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 LCATP04180 440 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 HLA-DPB1P04440 258 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 WNT2P09544 360 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 SELEP16581 610 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 ZNF12P17014 697 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 ANOS1P23352 680 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 PMELP40967 661 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 MNAT1P51948 309 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 PPP1R8Q12972 351 aaKnown RBP16.21■□□□□ 0.19
CD55-209ENST00000488171 ZNF154Q13106 437 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 LYPD4Q6UWN0 246 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 C12orf54Q6X4T0 127 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 MOGAT3Q86VF5 341 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 LINC00471Q8N535 108 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 PROKR2Q8NFJ6 384 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 C22orf15Q8WYQ4 148 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 POP5Q969H6 163 aaKnown RBP16.21■□□□□ 0.19
CD55-209ENST00000488171 TMEM165Q9HC07 324 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 ESM1Q9NQ30 184 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 VNN3Q9NY84 501 aa16.21■□□□□ 0.19
CD55-209ENST00000488171 TVP23AA6NH52 213 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 TRIM77I1YAP6 450 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 CCNB2O95067 398 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 ZNF823P16415 610 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 ZNF181Q2M3W8 571 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 TUSC1Q2TAM9 212 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 ESCO2Q56NI9 601 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 LCN8Q6JVE9 175 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 BPIFB2Q8N4F0 458 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 SLC37A3Q8NCC5 494 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 OR51L1Q8NGJ5 315 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 OR2T4Q8NH00 348 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 SLCO4A1Q96BD0 722 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 JMJD8Q96S16 334 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 MAGIXQ9H6Y5 334 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 DDX28Q9NUL7 540 aaKnown RBP16.2■□□□□ 0.18
CD55-209ENST00000488171 LRCH1Q9Y2L9 728 aa16.2■□□□□ 0.18
CD55-209ENST00000488171 M0R135 149 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 OTX1P32242 354 aaPredicted RBP16.19■□□□□ 0.18
CD55-209ENST00000488171 GATA4P43694 442 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 TPTEP56180 551 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 ACTG1P63261 375 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 PAX2Q02962 417 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 MALLQ13021 153 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 MAB21L1Q13394 359 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 SNAI3Q3KNW1 292 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 KLF17Q5JT82 389 aaPredicted RBP16.19■□□□□ 0.18
CD55-209ENST00000488171 FAM201AQ5SY85 155 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 PGAP1Q75T13 922 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 LNX2Q8N448 690 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 ZDHHC22Q8N966 263 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 AQP11Q8NBQ7 271 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 OR9Q1Q8NGQ5 310 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 OR4Q3Q8NH05 313 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 ZNF799Q96GE5 643 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 NSL1Q96IY1 281 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 TMEM246Q9BRR3 403 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 RBM4Q9BWF3 364 aaKnown RBP16.19■□□□□ 0.18
CD55-209ENST00000488171 TBC1D23Q9NUY8 699 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 AUP1Q9Y679 476 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 COMMD3-BMI1R4GMX3 469 aa16.19■□□□□ 0.18
CD55-209ENST00000488171 TMEM89A2RUT3 159 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 C5orf63A6NC05 138 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 FSTL3O95633 263 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 CFPP27918 469 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 COMPP49747 757 aaPredicted RBP16.18■□□□□ 0.18
CD55-209ENST00000488171 MS4A2Q01362 244 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 DHFR2Q86XF0 187 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 ARHGAP24Q8N264 748 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 CELF2-AS1Q8N7Q2 184 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 SPTSSAQ969W0 71 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 CCT8L2Q96SF2 557 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 TSSK6Q9BXA6 273 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 NMNAT2Q9BZQ4 307 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 MUC13Q9H3R2 512 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 U3KQV3 271 aa16.18■□□□□ 0.18
CD55-209ENST00000488171 LRRC30A6NM36 301 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 GYPBP06028 91 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 RPS2P15880 293 aaKnown RBP16.17■□□□□ 0.18
CD55-209ENST00000488171 CPT2P23786 658 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 FPR2P25090 351 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 CD200P41217 278 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 RAD23AP54725 363 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 PAX8Q06710 450 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 CRMP1Q14194 572 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 TRIM25Q14258 630 aaKnown RBP16.17■□□□□ 0.18
CD55-209ENST00000488171 PCK2Q16822 640 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 MICAQ29983 383 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 ZNF404Q494X3 552 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 ARMCX4Q5H9R4 360 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 OR2T5Q6IEZ7 315 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 MRPL21Q7Z2W9 205 aaKnown RBP16.17■□□□□ 0.18
CD55-209ENST00000488171 DCXRQ7Z4W1 244 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 KLBQ86Z14 1044 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 OR2T29Q8NH02 315 aa16.17■□□□□ 0.18
CD55-209ENST00000488171 MRI1Q9BV20 369 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms