RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 NIPAL2Q9H841 368 aa9.95□□□□□ -0.82
CLIP2-207ENST00000487447 RNPEPL1Q9HAU8 725 aa9.95□□□□□ -0.82
CLIP2-207ENST00000487447 DYNLRB1Q9NP97 96 aa9.95□□□□□ -0.82
CLIP2-207ENST00000487447 CYSLTR2Q9NS75 346 aa9.95□□□□□ -0.82
CLIP2-207ENST00000487447 CLN6Q9NWW5 311 aa9.95□□□□□ -0.82
CLIP2-207ENST00000487447 H2AFY2Q9P0M6 372 aaPredicted RBP9.95□□□□□ -0.82
CLIP2-207ENST00000487447 TAAR3PQ9P1P4 343 aa9.95□□□□□ -0.82
CLIP2-207ENST00000487447 NKX1-2Q9UD57 310 aaPredicted RBP9.95□□□□□ -0.82
CLIP2-207ENST00000487447 PURGQ9UJV8 347 aaKnown RBP9.95□□□□□ -0.82
CLIP2-207ENST00000487447 COPS3Q9UNS2 423 aa9.95□□□□□ -0.82
CLIP2-207ENST00000487447 GMPPBQ9Y5P6 360 aa9.95□□□□□ -0.82
CLIP2-207ENST00000487447 USF3Q68DE3 2245 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 ZSCAN5BA6NJL1 495 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 PRR32B1ATL7 298 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 J3QRE1 110 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 PHYHO14832 338 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 MPZL2O60487 215 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 ZNF254O75437 659 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 CD55P08174 381 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 MRPL3P09001 348 aaKnown RBP9.94□□□□□ -0.82
CLIP2-207ENST00000487447 CSF3P09919 207 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 DSCR9P59020 149 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 PSMA6P60900 246 aaKnown RBP9.94□□□□□ -0.82
CLIP2-207ENST00000487447 MRPS11P82912 194 aaKnown RBP9.94□□□□□ -0.82
CLIP2-207ENST00000487447 GK2Q14410 553 aaPredicted RBP9.94□□□□□ -0.82
CLIP2-207ENST00000487447 NKPD1Q17RQ9 610 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 CLEC12BQ2HXU8 276 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 PCGF3Q3KNV8 242 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 SNAI3Q3KNW1 292 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 ALKBH6Q3KRA9 238 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 FAM209AQ5JX71 171 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 KCTD18Q6PI47 426 aaPredicted RBP9.94□□□□□ -0.82
CLIP2-207ENST00000487447 ZCCHC24Q8N2G6 241 aaKnown RBP9.94□□□□□ -0.82
CLIP2-207ENST00000487447 ASB17Q8WXJ9 295 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 Q96MF0 132 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 SMR3AQ99954 134 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 REPIN1Q9BWE0 567 aaKnown RBP9.94□□□□□ -0.82
CLIP2-207ENST00000487447 OPA3Q9H6K4 179 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 CENPMQ9NSP4 180 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 PTTG3PQ9NZH4 202 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 DNAJC27Q9NZQ0 273 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 LAMP5Q9UJQ1 280 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.94□□□□□ -0.82
CLIP2-207ENST00000487447 LRP12Q9Y561 859 aa9.94□□□□□ -0.82
CLIP2-207ENST00000487447 ARID1AO14497 2285 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 A0A096LNT2 108 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 C5orf63A6NC05 138 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 IQCF6A8MYZ5 107 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 VWC2LB2RUY7 222 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 H0YJX3 145 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 NDUFS8O00217 210 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 SSX4O60224 188 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 ENTPD6O75354 484 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 MT-ND5P03915 603 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 LCATP04180 440 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 ERCC1P07992 297 aaPredicted RBP9.93□□□□□ -0.82
CLIP2-207ENST00000487447 H2BFMP0C1H6 154 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 OR2T7P0C7T2 308 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 NAT2P11245 290 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 FOSL1P15407 271 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 CX3CR1P49238 355 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 ZNF81P51508 661 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 PRKXP51817 358 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 HCCSP53701 268 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 EGR3Q06889 387 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 CDK5R2Q13319 367 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 RIPK1Q13546 671 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 LRRC36Q1X8D7 754 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 ZMAT1Q5H9K5 638 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 ZNF684Q5T5D7 378 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 ZNF691Q5VV52 312 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 TTC23Q5W5X9 447 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 LRRN1Q6UXK5 716 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 Q6ZR03 302 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 SLC35F2Q8IXU6 374 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 ZNF679Q8IYX0 411 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 ZNF786Q8N393 782 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 GALNT4Q8N4A0 578 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 RFLNBQ8N5W9 214 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 ZNF525Q8N782 197 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 OR52H1Q8NGJ2 320 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 OR51G2Q8NGK0 314 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 OR2T27Q8NH04 317 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 C10orf105Q8TEF2 133 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 THEM6Q8WUY1 208 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 SNX33Q8WV41 574 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 APH1BQ8WW43 257 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 CMBLQ96DG6 245 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 COX4I2Q96KJ9 171 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 DIRC2Q96SL1 478 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 VRK1Q99986 396 aaPredicted RBP9.93□□□□□ -0.82
CLIP2-207ENST00000487447 SP140LQ9H930 580 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 MRPS18AQ9NVS2 196 aaKnown RBP9.93□□□□□ -0.82
CLIP2-207ENST00000487447 ZDHHC8Q9ULC8 765 aa9.93□□□□□ -0.82
CLIP2-207ENST00000487447 EXOGQ9Y2C4 368 aaKnown RBP9.93□□□□□ -0.82
CLIP2-207ENST00000487447 FLNAP21333 2647 aaKnown RBP9.92□□□□□ -0.82
CLIP2-207ENST00000487447 ACOD1A6NK06 481 aa9.92□□□□□ -0.82
CLIP2-207ENST00000487447 H0YAE9 185 aa9.92□□□□□ -0.82
CLIP2-207ENST00000487447 XRCC2O43543 280 aa9.92□□□□□ -0.82
CLIP2-207ENST00000487447 SRSF10O75494 262 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms